| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3970 |
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| Symbol | |
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| ID | 3936451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 4067539 |
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| End bp | 4068495 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906348 |
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| Product | fumarase alpha subunit |
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| Protein accession | YP_511912 |
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| Protein GI | 89056461 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATACCGA TATCTCTCAT TCAGGAGACA GCCGAGGGTC TGATGGACAA GGCGGCGATC
GAGATACCGC AGGACTATCT GGACGGGTTG CAGGAGGCGG CGCGGACGGA GGATGGGGAC
CTGTCGTCCT TTGTGCTTAA GGCGATGCTG GATAACTACG AGGCCGCCAA GGAGGATCGC
CGCGCGATGT GTGGCGACAC GGGCGTGCCA CGCTGGTTCG TGAAGATGGG AAATGATGCG
AGCGTCGAGG GGGGCATGGT GGCGCTGGAG GCCGCGTTGC GCCGCGCGAC GGCCAACGCG
ACCAACGGCG TGCCTTTGCG GCCCAACCGG GTGCATCCGC TATGGCGGAC GGATCACAAC
AACAATGTCG GTATCGGTGC GCCCGAGATC GAGTATGGGT TCGAGCCGGA AGGGGAATGG
ATTGACCTGA TCACGGTCCA TAAAGGCGGG CTGTTCGGCA CCGACTACCG CATGCTGTTC
CCAAGCGACG GCCTTCAGGG GATCAAGCGC TTCTACCTTG ATAGCCTGAT GGCGTTTGGC
AAGCGCGGCC TCGCGTGTCA GCCCGCGATC ATCGGGATCG GGCTGGGAGG ATCCAAGGAT
ATCTGCATGA CGTTGGGCAA GCGGGCGTCG ACGTTGCGGG TTGTTGGCTC GCGCAATTCT
GACCCGCGCA TCGCCGAGAT GGAGGACGAG TTCAAGGCGT TGGGCAACTC CATCGGCATG
GGCGCGATGG GCTTTGTGGG CAAGAACATG GTGATCGATT GCAACATCGA GGTCGGCTAT
TGCCACACCG GCGGCCTGCC GATGTCAGTG CACGCGTTCT GCCTGTCGTC GCGCCGGGCC
GTGGCGCGTA TCCACGCCGA TGGACGGGTG GAGCATCGCA CGGACCCCGA TTGGTTCACC
GACTATCAGC GTCGCGAAAC GATTGACTGG CCTCTGGCGC AGGAGGCCGC GGAATGA
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| Protein sequence | MIPISLIQET AEGLMDKAAI EIPQDYLDGL QEAARTEDGD LSSFVLKAML DNYEAAKEDR
RAMCGDTGVP RWFVKMGNDA SVEGGMVALE AALRRATANA TNGVPLRPNR VHPLWRTDHN
NNVGIGAPEI EYGFEPEGEW IDLITVHKGG LFGTDYRMLF PSDGLQGIKR FYLDSLMAFG
KRGLACQPAI IGIGLGGSKD ICMTLGKRAS TLRVVGSRNS DPRIAEMEDE FKALGNSIGM
GAMGFVGKNM VIDCNIEVGY CHTGGLPMSV HAFCLSSRRA VARIHADGRV EHRTDPDWFT
DYQRRETIDW PLAQEAAE
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