| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3958 |
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| Symbol | |
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| ID | 3936439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4056737 |
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| End bp | 4057618 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637906336 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_511900 |
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| Protein GI | 89056449 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.411304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACCAAGT TCTTCAGACG CCTCCGCTGG CCGGATTACC TGATCGCAGC CCTCCTGGTC
GCGTTCTTCG GGTACATCGC CTATGCGATC GAGGGCACGC TGAACTACAA TTGGCGCTGG
CATCTGATCC CCAATTACAT CGTCGGCTGG CACACCTCGC GGGAAGAATA CTTCGCCAAT
CTCCTGCTAC AGGGCCTCGC CGCCACGATC CGCATCTCGA TCTATGCCAG TGTTCTGGCG
CTGATCCTCG GCACTGTCCT TGGTATCGCG CGGACCTCCG CCAACCTCAC CATCCGCATG
TTGGCACGCA CCTATCTGGA ACTCTTGCGC AACATCCCCC CCGTCGTGGT GGTGTTCATC
TTCTTTTTCT TTCTGTCTCA ACAACTTATC GACCTGCTCA ACCTTGAGCG CTGGGCACGT
GGCATCGCAC GGCAAGACGA CATCGCGGTG TGGGGGTTCT TCTTCGGGGA CATGCGCCGC
TTCCCGTCCC TGATCTCCGG CGTCGTCGTT CTGGCCCTGT TTGAAAGCGC TTTTGTGGGC
GAAATCGTCC GTGCAGGCAT CCAATCCGTT CCCAAAGGAC AGCGGGAAGC CGCCCGGTCC
ATCGGCATGA GCCGCTGGCA AGAGCTTCGC TACATCGTCC TGCCGCAAGC GATGAAAAAG
GTCGTGCCGC CCATGGCCAA CCAATTCATC ACGCTGATCA AGGACAGTTC CATCATTTCG
CTGATCTCCG TGCAGGAGCT GACCTACAAA ACCGTCGAAC TCGTCGCCTC CTCCCGCCTC
ATCTTCGAGG CCTGGATCAC CACGGCAGCC TTCTACTTCA TCGTGTGTTT TGGGCTGAGC
AGGCTGTTTG CCCGGTTGGA GAAGGGGCGG AAGAAGGGGT AG
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| Protein sequence | MTKFFRRLRW PDYLIAALLV AFFGYIAYAI EGTLNYNWRW HLIPNYIVGW HTSREEYFAN
LLLQGLAATI RISIYASVLA LILGTVLGIA RTSANLTIRM LARTYLELLR NIPPVVVVFI
FFFFLSQQLI DLLNLERWAR GIARQDDIAV WGFFFGDMRR FPSLISGVVV LALFESAFVG
EIVRAGIQSV PKGQREAARS IGMSRWQELR YIVLPQAMKK VVPPMANQFI TLIKDSSIIS
LISVQELTYK TVELVASSRL IFEAWITTAA FYFIVCFGLS RLFARLEKGR KKG
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