| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3934 |
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| Symbol | |
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| ID | 3936415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4031566 |
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| End bp | 4032474 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637906312 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_511876 |
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| Protein GI | 89056425 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.227216 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCGCCA CTGATCCCAT GCTGGACAGC GGTGCGGATT TCCGCACACG GCTCCAGAAC
TGGCTTCCCA AGATCGTTCT CGCCCCGTCC TTCGCGGTGA TGGTGATCTT CGTCTACGGG
TTCATCGCCT TCACGATCTA CCTCAGCTTC ACCGGCTCGC GCATGTTGCC GAGCTTCGAT
CTGGTCGGCT GGCAGAATTA TGAGCGCCTG TTCCGCGTCC GGCAATGGGA CACGGCGATC
ATCAATCTTG GCATCTTCGC CGGGCTCTAC ATCGTCATCA GCACGATCAT CGGCCTGATG
CTGGCGATCT TCCTCGACCA GAAAATCCGC GGCGAAGGCT TCCTGCGCCC GATCTTCCTC
TACCCCATGG CGCTGTCGTT CATCGTGACG GGCACGGCGT GGAAATGGTT CCTAGACCCG
GCCATCGGGT TGGAAGTCAC CATGCAGCGC TGGGGCTGGA CCTCGTTTGA ATTTGACTGG
ATCAAGGACA GCGACATGGC GATCTACACC ATCGTCATCG CCGCGGTCTG GCAATCCTCG
GGCTTCGTGA TGGCGATGTT CCTCGCGGGC CTGCGCGGGA TCGACAATGA AATCCTCAAG
GCCGCACAAA TGGACGGTGC GTCGAACTTT CAGATGTATC GCCGGATCAT CCTGCCGCAG
CTTCGGCCTG CGTTCCTCAG CGCCTTCGTG ATCCTGTCGC ACCTGGCGAT TAAATCCTAC
GACCTTGTGG TCGCGATGAC CGATGGCGGC CCCGGCACGT CCACCTGGCT GCCTGCGCTG
TTCATGTATG AATACACTTT CACGCGGAAC CAGATGGGGA TCGGCGCGGC CTCCGCCGTG
ATCATGCTGA TGACCATCGC CGCGATCATG GTGCCCTATC TCTACGCCGA ATTGCGGGAG
CAGAAGTAA
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| Protein sequence | MAATDPMLDS GADFRTRLQN WLPKIVLAPS FAVMVIFVYG FIAFTIYLSF TGSRMLPSFD
LVGWQNYERL FRVRQWDTAI INLGIFAGLY IVISTIIGLM LAIFLDQKIR GEGFLRPIFL
YPMALSFIVT GTAWKWFLDP AIGLEVTMQR WGWTSFEFDW IKDSDMAIYT IVIAAVWQSS
GFVMAMFLAG LRGIDNEILK AAQMDGASNF QMYRRIILPQ LRPAFLSAFV ILSHLAIKSY
DLVVAMTDGG PGTSTWLPAL FMYEYTFTRN QMGIGAASAV IMLMTIAAIM VPYLYAELRE
QK
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