| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3932 |
|---|
| Symbol | |
|---|
| ID | 3936413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 4029489 |
|---|
| End bp | 4030604 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637906310 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_511874 |
|---|
| Protein GI | 89056423 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.855915 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTTTTC TAGACATCAA CAACGTCACC AAATCCTACG GCGCGGTGGA GGTCCTGCAT
AAGGTCGACA TTCAGGTGCA GGAGGGGGAG TTTCTTGTGC TTGTCGGCCC GTCCGGCTGC
GGCAAATCCA CATTGCTCAA TATGATCGCG GGGCTGGAGG GGATTTCCAG CGGAGAGATC
GCCATCAAGG ACCGCGTCGT CAACGACGTC ACGCCGTCCA AGCGCAACAT CGCGATGGTG
TTCCAGTCCT ACGCGCTCTA CCCCAACATG ACCGTGGGCC AGAACATCAC CTTTGGCTTG
GAAATGCAGG GCACCCCGAA ACCCGAACGT GACAAAGCCA TGTCCGAAGT CGCAAGCCTG
TTGCAGATCG AAAACCTGCT GGATCGTAAG CCCGGCCAGC TCTCGGGCGG GCAACGTCAG
CGTGTTGCTA TGGGCCGTGC GCTGGTGCGG GACCCGGACG TGTTCCTGTT TGATGAGCCG
CTGTCCAACC TCGATGCCAA GCTGCGCGTC GACATGCGGA CCGAGATCAA GAAGCTGCAC
CAGAACCTGG GCACCACCAT CGTCTACGTC ACCCACGACC AGATCGAGGC GATGACTTTA
TCCACACGCA TTGCCGTGAT GTACGATGGC TACGTGCAGC AACTCGGCAC CCCGAAAGAG
ATCTACGACG ACCCTGCCAA CCTCTTTGTG GCGACCTTCA TGGGCTCGCC CGCGATGAAC
GTGCTGGATG CGGAACTGGT TGAGATGAAC GGCGCGCTTC ACGCAAAATT CTCTGGTGCG
GAAGGGGCGG ATATCAATCT GCGGATTGAA GACGCGCCCG AGGCATACGG CGACTATATC
GGCAAACGCG TGATGCTGGG CATCCGTCCT GAGGCGATCA CGGACCCGGA AGGCGCGGAC
CGCAACGCCC GCAACATCCA GATGATGACG AACACCGTCA GCGTCACGGA ACCGGCTGGT
GCGGATACGT TTGTCAGCAC CACGCTCGCG GGAAAAGACT GCATTGCGCG GATGCGGGCG
GACGCCGATG TCCACGCCAG TCAACCGTTC GAGTTTGCGG TGAACATGGA CAAGGCGGTT
CTGTTCGACC CTAAAACCGA GGCGCGGATC GCATAA
|
|---|
| Protein sequence | MGFLDINNVT KSYGAVEVLH KVDIQVQEGE FLVLVGPSGC GKSTLLNMIA GLEGISSGEI
AIKDRVVNDV TPSKRNIAMV FQSYALYPNM TVGQNITFGL EMQGTPKPER DKAMSEVASL
LQIENLLDRK PGQLSGGQRQ RVAMGRALVR DPDVFLFDEP LSNLDAKLRV DMRTEIKKLH
QNLGTTIVYV THDQIEAMTL STRIAVMYDG YVQQLGTPKE IYDDPANLFV ATFMGSPAMN
VLDAELVEMN GALHAKFSGA EGADINLRIE DAPEAYGDYI GKRVMLGIRP EAITDPEGAD
RNARNIQMMT NTVSVTEPAG ADTFVSTTLA GKDCIARMRA DADVHASQPF EFAVNMDKAV
LFDPKTEARI A
|
|---|
| |