| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3927 |
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| Symbol | |
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| ID | 3936408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 4023423 |
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| End bp | 4024427 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906305 |
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| Product | LacI family transcription regulator |
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| Protein accession | YP_511869 |
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| Protein GI | 89056418 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGTC GCCCCACCAT TCTGGACGTC GCAGCCCGCG CGGGCGTGTC GAAATCAACC
GTGTCGCTGG TGTTGCAGAA CTCCAAACAG GTGAAGGCGG AAACCCGCGA GGCTGTGCGC
GCCGCAATGG CGGATATCGG CTACGTCTAC AACCGTGCGG CGGCGCAGAT GCGGTCGCAA
TCGGCGGGGT TGGTGGGGCT GGTGATCAAC GACCTGCGCA ACCCGTTCTT CACCGAATTT
GCGACCGTGT TGCAGATGAC TTTGGCCGCC AAAGGCTATG CGACGGTCAT TGCGAATTCT
GACGAAGATG CTGATTTGCA AGCAAAATTG ATGGGCTCGA TGATCGAGCA TGGCGTGTCC
GCGCTGGTCG TGTCCCCGGC CTATGACGAC GGTGGCGACG CCTTTGATCA GGTGGAGCGC
GCGGGCATTC CGGCCATGCA GGTTCTGCGC AAAACCGACC CGCGGACTGG CCTGTTTCCG
TTCGCGTCCT TCGACTATGC ATCGGGGTCG GCCAAGGCCA CCCGGCACCT GATGAACCAG
GGCGCGACCC GCATCGCGTT TGTCGGCGGC ATGGAGGGGC GCGCGATCAC CGAAGAACGC
AAGTCCGGCT ACCTGGCAGA GATCAAGCGC GCGGGTGCGG AGCCCTTTGT GCTGCATGGC
CGCAGTTCCC GCGCCTTCGG GCTGGAGGCG GCAATGGCTC TGCCGATGGA TGTCGATGCG
GCCATATGTT TCAACGACTT GGTCGCCTTG GGCATGCTGT CCGGCTTTGC CCGGGAAGGG
GTGGAACTGG GCCGGGATTT CCGCCTTGTA GGCTTTGACG ATATTGAGGA TTGCGCACAG
GTCTGGCCGC AGGTTTCCTC CGTCGCGTGC GACATCTCGG GCTTTGCGCA GGGCATCGCC
GACGGATTGT TGGCCTGGAT GCAGGACGGC GTGACCCCAC CGCCCGAGCA TCGAGCCCCG
GTTCACCTTG TCGCCCGCAC CTCCAGCACC GGACGAAACC CATGA
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| Protein sequence | MTRRPTILDV AARAGVSKST VSLVLQNSKQ VKAETREAVR AAMADIGYVY NRAAAQMRSQ
SAGLVGLVIN DLRNPFFTEF ATVLQMTLAA KGYATVIANS DEDADLQAKL MGSMIEHGVS
ALVVSPAYDD GGDAFDQVER AGIPAMQVLR KTDPRTGLFP FASFDYASGS AKATRHLMNQ
GATRIAFVGG MEGRAITEER KSGYLAEIKR AGAEPFVLHG RSSRAFGLEA AMALPMDVDA
AICFNDLVAL GMLSGFAREG VELGRDFRLV GFDDIEDCAQ VWPQVSSVAC DISGFAQGIA
DGLLAWMQDG VTPPPEHRAP VHLVARTSST GRNP
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