| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3891 |
|---|
| Symbol | rpsU |
|---|
| ID | 3936372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3987535 |
|---|
| End bp | 3987741 |
|---|
| Gene Length | 207 bp |
|---|
| Protein Length | 68 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637906269 |
|---|
| Product | 30S ribosomal protein S21 |
|---|
| Protein accession | YP_511833 |
|---|
| Protein GI | 89056382 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0666745 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCA GTGTTCGCGA CAACAATGTC GATCAAGCGC TCCGTGCCCT GAAGAAAAAA
CTTCAGCGCG AAGGCGTCTT TCGTGAGATG AAGCTCAAGC AGCATTACGA AAAACCCTCG
GAGAAGCGCG CACGCGAGAA GGCTGAAGCC ATCCGCCGTG CCCGCAAGCT GGCGCGCAAA
AAGTTGCAGC GCGAAGGGAT GCTCTAA
|
|---|
| Protein sequence | MQVSVRDNNV DQALRALKKK LQREGVFREM KLKQHYEKPS EKRAREKAEA IRRARKLARK
KLQREGML
|
|---|
| |