Gene Jann_3873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3873 
Symbol 
ID3936354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3972208 
End bp3972561 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content63% 
IMG OID637906251 
Producthypothetical protein 
Protein accessionYP_511815 
Protein GI89056364 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.193741 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG ATTACCAAAC CCGCATCGCC CGCGCGATGG CCGAGCTTGA GGCCTCAAGC 
ATCAACAGCC TCAACTATGC GCCCCCGCTC TTTCGCGTGG CGCGGCGGCT GGGCCTGAAA
CCACGCCCAC CCCATTACAT GAGTTTCGGA CGCGCCGTCC TGATCCTCGG GCCAATTTTC
GGGATCTTCT GGGGCGCGCT TATGTACGTC GTGCAGTGGC GCGCGGCAGA TCTTGCGTTG
GGCTTGGTCG TGTCGGCATC CCTGATGGCG GGTGCATTGT TCGGATTGCT GATGGCAGGC
TACTACCGAT GGGCGGGCAG CCAGGCGGGG CTGACCAAAT GGGAAGAGCT GTAG
 
Protein sequence
MADDYQTRIA RAMAELEASS INSLNYAPPL FRVARRLGLK PRPPHYMSFG RAVLILGPIF 
GIFWGALMYV VQWRAADLAL GLVVSASLMA GALFGLLMAG YYRWAGSQAG LTKWEEL