| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3838 |
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| Symbol | |
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| ID | 3936318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3932710 |
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| End bp | 3933972 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637906216 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_511780 |
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| Protein GI | 89056329 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.754768 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATCCA TTTACAAGAC CGGTGCCGCA GCACTGGCAG CAGCGACCAT GCTTTCCGGC
GTTGCCTATG CAGACGGCCA CGGCGTTTCT GGCCCCCTGC GCATCTTCTC GGACATGTCA
AATCCGGCTC CGCGCGCCGT CATGGAAGGC ATGGTTGAGC GGTTCACAGC CGAAAATCCC
GGCGTCGAGG TCGAACTGGT CATCACTGAC CGCGAGGCCT GGAAGACGCA GATCCGCAAC
GTGCTGCAAT CCGGCACCGC TGACATCGTC AACTGGTACG CCGGGAACCG CATGGCCCCC
TACGTAGATG CGGGCCTGTT CATGGACATC AGCGACCTCT GGGAAGAGGG CGGCCTGACC
GAAACGCTCG CCTCCACCCA AGGCTCCATG ACCATGGATG ACGGCATCTG GGGCGTTCCC
TACACATACT ATCAGTGGGG CGTATACTAC CGCGAGGATA TCTTCGCAGA GCTTGGCCTT
GAAGCGCCGA CGACCTGGGA AGAAGAACTG GCAAATTGCA CCGCGATCGT CGAATCCGGT
CGTGCCTGCT ACACCATCGG CACGCAGTTC CTGTGGACCG CTGGCGGCTG GTTCGACTAC
CTCAACATGC GCACCAATGG CTACGACTTC CACATGTCCC TGACAGCTGG CGAAGTAGAG
TGGACCGATC CCCGCGTCCG CGCCACGTTC GAGAACTGGC AGACCCTGAT CGATATGGGC
GGCTTTATCG CTGACCACCA GTCCTATTCT TGGCAGGAAG CGTTGCCCTT CATGGTCAAC
GGCGAAGCCA CGGCATATCT GATGGGGAAC TTCGCAGTGG CACCGCTGCG CGAAGCTGGC
CTCTCGGATG ATCAGCTGGG CTTCTACCAG TTCCCGCAGA TCGACGCCGC GATTGAGCCG
GGTGAAGATG CCCCGACCGA TACCTTCCAC ATCGCGGCTA ATGCCGAGAA CGTGGAAGCG
GCAGAGGCGT TCCTCCTGTT CGTGACCAGC GCCGAGAACC AGACGCTGAT CAACAACGGC
GACAACCTGG GTCAGCTGCC CGTCAACGCC AACTCCGGCG TCGATGATGA TGAATTCCTG
AATGCGGGCT TCGACATGCT GTCGAACAAC GCAGGCGGCG GCATCGCGCA GTTCTTTGAC
CGTGACGCAC CGGCTGAAAT GGCGCAGGTC GCCATGCAGG GCTTCCAGCA GTTCATGGTT
GATCCGTCTA CGCTCGACCA GGTTCTGCAG ATCCTAGAAG GCGCGCGTCA GCGGATTTAC
TAA
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| Protein sequence | MRSIYKTGAA ALAAATMLSG VAYADGHGVS GPLRIFSDMS NPAPRAVMEG MVERFTAENP
GVEVELVITD REAWKTQIRN VLQSGTADIV NWYAGNRMAP YVDAGLFMDI SDLWEEGGLT
ETLASTQGSM TMDDGIWGVP YTYYQWGVYY REDIFAELGL EAPTTWEEEL ANCTAIVESG
RACYTIGTQF LWTAGGWFDY LNMRTNGYDF HMSLTAGEVE WTDPRVRATF ENWQTLIDMG
GFIADHQSYS WQEALPFMVN GEATAYLMGN FAVAPLREAG LSDDQLGFYQ FPQIDAAIEP
GEDAPTDTFH IAANAENVEA AEAFLLFVTS AENQTLINNG DNLGQLPVNA NSGVDDDEFL
NAGFDMLSNN AGGGIAQFFD RDAPAEMAQV AMQGFQQFMV DPSTLDQVLQ ILEGARQRIY
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