| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3835 |
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| Symbol | |
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| ID | 3936315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3928476 |
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| End bp | 3930635 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637906213 |
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| Product | glycoside hydrolase, clan GH-D |
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| Protein accession | YP_511777 |
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| Protein GI | 89056326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.377563 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTG TCGTGGACGA CAAGATAGCT GACGGCTTGC CCGTGGGCAC GAAGGCTGAT
GTCGCCAAGC GGGACGTGCG GACCTGGCGT CTGGATGATG ACGGGCGTCA GACCTTGGTG
CTGGCTGCCA CCGGTGACCG CCTGCCTCAG GTCGTCTATT GGGGTGCGCC CCTGCCGATG
ACGGACGATC TTACAACGCT CCAGGCCGCC CATGCATTGG ATGTGACAGG CGGAATGCTG
GACGAAAACC CGGACCTGTC GCTGTGCCCG GAGGCGATCC GCACCTTTCC CGGGCAGCCC
GGGTTGATCC TGAGGGATGG CGATGGCACG CCGCTGCTGC CGAAGTTCTG CTACGAAAAT
GAAGAACTCA GCGAAGACGG GCTAGTCCTG ATCTATGCCG ATGAACCCAA CGGCCTGACG
CTTTCGTTCC ATTTCGCCAC GGACCCATCA ACCCGCATCA TTACGGCCAA GACCCGGCTG
GATGCGACCC GTCCCGTGCA TCTGCACTGG CTCGCGGCCC CGGTTCTGCC CGCGCCGCAG
CAAAGCGAGG AGATGATCGA CTTTGCGGGC CGCTGGACCG GAGAGTTTCA GACCAATCGC
ACCGCGTGGT CGCCGGGCAT GCGGTACCGC GAAAACCGCA CGGGCCGTAC CGGGCATGAA
CATTTCCCGG GCCTTCTGAT CCCGGTGACG GGCTGCACGA ACACGCAGGG GGAGGCTTAC
GGGTTCCACT ACGGCTGGTC GGGCGGGCAC AAGATGATTG CCGAGGAGTT GCCCGATGGG
CGTCGCCAGA TCCAGTTCGG CCACGCCGCG CGGATGGAAA CGCAGGCCGC GACGACATTC
TCATCCGCGA CACTCTATGT CACCTATTCC GGCGTCGGGC TGAATGGCTG CGCCGTCAGC
TTCCAACGCC ATCTGCGCGA CCGGATTGTC ACTTGGCCCG ACCCAGACCG CCCGCGCCCG
GTGCATTACA ACTGCTGGGA AGCGGTCTAT TTCGATCACA AGCTTCCTGT CCTCAAGGAC
ATTGCAGAAC GCGCCGCAGA CCTTGGCGCA GAGCGCTTCG TGCTGGATGA TGGCTGGTTT
GGTCAACGCG ATGACGACAC CCGCAGCCTG TCCGACTGGG AGGTGGATGT CAGGAAATAT
CCCGATGGAT TGGGCCCGCT GATTGACCAT GTCCACGGCC TTGGCATGAC TTTTGGCATC
TGGTTCGAGC CTGAGATGAT CAACCCCGAC AGCGACATCC ACCGCGCCCA CCCCGATTGG
GCGTTGGGCG GGGAAGACCA GACCCTGGGC CGTCAGCAAA AGGCGCTCAA CATGGCGCTG
CCAGAGGTGC GCGATTTCAT CTACGGGCGC ATGGCGGCGG TGCTGGCCGC GCATCCCATC
GACTACATCA AATGGGACCA CAACCGTGTT CTGCCGATGC CCGATGCGGA TCAGACGCGC
GGCTCCTACG CGTTGATTGA CCGTCTGCGC GCGGACTTCC CGCATGTGGA GATTGAGTCC
TGCGCGTCCG GTGGCGGGCG GATTGATTTC GGTATCATGC AGCGGACCCA ACGGATTTGG
TTGAGCGACT CCAATGACGC GCTGGAACGT CTGCGCATCC AGCACGATGC CGCGCTGTTC
CTGCCCATCG CCGTGACCGG CTCTCATGTC GGGCCACGGC GGTGCCATAC ATCTGGTCGT
GTGTTTGACA TCTCCTTCCG CGCCTGGGTT GCGGCCCAAC GTCATATGGG GTTCGAGATG
GACCCGCGAG AACTGGACGC ACGGGAGGCG GCCGTTCTGC GAGAGGTCAC GAGCTGGTGG
AAGTTCAACC GCGACTGGAT GCTGACGGCA GATATTCTGC GCCTAGACAG TGCCGATCCG
GCAGTGATAG CCGAACAACA GATGACCCGC GACGGCGACC GCTTCGTTGT CTTTGCTGGC
AAAGCTGCGA CGTCTGACCA GATCGCGCCG CGCCCCCTGC GCCTGACCGC ATTGGATGAT
CAGGCGCGCT ACAGGATCAC GCTGATGAAC CGGGGCACCG CCCCGGCGCT GAGCCGTGGC
ATGCCTGCGC TGAAGGACGG CCCCATAGAG GTCTCGGGCG CGTGGCTAAT GCATCATGGC
TTGACCTTGC CATGGAACTA CCCCGACACA ATGTGGGTGC TGGAGGGCGA ACGCCTATGA
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| Protein sequence | MDIVVDDKIA DGLPVGTKAD VAKRDVRTWR LDDDGRQTLV LAATGDRLPQ VVYWGAPLPM
TDDLTTLQAA HALDVTGGML DENPDLSLCP EAIRTFPGQP GLILRDGDGT PLLPKFCYEN
EELSEDGLVL IYADEPNGLT LSFHFATDPS TRIITAKTRL DATRPVHLHW LAAPVLPAPQ
QSEEMIDFAG RWTGEFQTNR TAWSPGMRYR ENRTGRTGHE HFPGLLIPVT GCTNTQGEAY
GFHYGWSGGH KMIAEELPDG RRQIQFGHAA RMETQAATTF SSATLYVTYS GVGLNGCAVS
FQRHLRDRIV TWPDPDRPRP VHYNCWEAVY FDHKLPVLKD IAERAADLGA ERFVLDDGWF
GQRDDDTRSL SDWEVDVRKY PDGLGPLIDH VHGLGMTFGI WFEPEMINPD SDIHRAHPDW
ALGGEDQTLG RQQKALNMAL PEVRDFIYGR MAAVLAAHPI DYIKWDHNRV LPMPDADQTR
GSYALIDRLR ADFPHVEIES CASGGGRIDF GIMQRTQRIW LSDSNDALER LRIQHDAALF
LPIAVTGSHV GPRRCHTSGR VFDISFRAWV AAQRHMGFEM DPRELDAREA AVLREVTSWW
KFNRDWMLTA DILRLDSADP AVIAEQQMTR DGDRFVVFAG KAATSDQIAP RPLRLTALDD
QARYRITLMN RGTAPALSRG MPALKDGPIE VSGAWLMHHG LTLPWNYPDT MWVLEGERL
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