Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3812 |
Symbol | |
ID | 3936292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3899628 |
End bp | 3901334 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637906190 |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_511754 |
Protein GI | 89056303 |
COG category | [E] Amino acid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0146] N-methylhydantoinase B/acetone carboxylase, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.135188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0136531 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGCTT CAAACGACGC CGGGCCCGGC AATGTCGCCT ACCAAGTCAT GTGGAACCGC CTGATCTCCA TCGTGGAGGA ACAGGCGCAA GCGTTGGTGC GCACGGCATT CTCCACCTCC GTGCGCGAGG CCGGAGATCT GAGTGCCGGG GTCTACGACA CCCATGGCCG CATGTTGGCT CAGGCCGTCA CTGGCACACC GGGCCACGTT AACGCCATGG CCGATGCGGT GCCGCATTTC ATCCGCCGCA TCGGGCGGGA CACGATGACT GAGGGCGACG TCTACATCAC CAATGACCCA TGGGAGGGCA CGGGGCATTT GCACGACATC ACCATGGTCA CGCCATCGTT CAAGGACGGC GCGCTGGTGG GGTTCTTCGC CTGCACCGCC CATGTGGTGG ATATCGGCGG GCGCGGGTTC GGGGCGGATG GCCAATCCGT CTACGAGGAA GGCCTCTACC TGCCGATCAT GCGGTTCGCC GCGCGTGGAG AGGTCGATGA AACGCTGATC CGTATCGTGC GCGGCAATGT CCGCGAGCCG GATCAACTGG TCGGCGACAT GTATGCGCTG GCAACCTGCA ACGAGATCGG CCACCGCCGT CTGATTGACA TGATGGCAGA GTTCACGCTT AGCGATCTGG ATGGAATCGC GGAGTTCATC CTGTCCAACT CCCGCCGCGC GACGTTGGAG CGGATCAATG CCCTGCCCCG CAAGGCTGCG GACGGAGAGA TGACGGTGGA CGGCTTCGAC ACACCAATCA CCCTGAAAGC ACGGGTCAGC ATCGAAGAAG ACAGGATCGT CACCGATTTC ACCGGCACAT CCGGCATCGA CAAGAAGGGC ATCAACTGCC CGATGGTCTA TACGAAAGCC TATGCCTGCT ATGCGCTAAA GGTCGCGATT GCGCCCGAGA TCCCCAACAA CGCGGCCTCT CTCGCGCCGT TTGAGGTGAC GGCCCCGGAA GGCACCATCG TCAACGCCAT GCATCCCGCG CCAGTGGCAT TGCGCCATAT CGTGGGGCAT TTCGTGCCAG ACGTCGTCTT CGATGCGTTC GACAAGATCG TCCCTGGCCT GGTGCCTGCC GAAGGGGCCG GGTGTCTATG CAACTTCCAG ATGTCGGTGC GGCCAACCGC GCCCGGTGGC AGGCGCGCTG AGGTGCTGAC ATTCAATTCC GGCGGCTCCG GCGCGCGGCC CGAAGTGGAC GGGTTGAACG CGACGGCCTT CCCCTCGGGC GTCATGACCA TGCCGATTGA GGCCACAGAA CACGCGGGCC CGGTGATCAT CTGGCGCAAG GAACTGCGCC CGGGCTCCGG CGGGGCGGGC AGGACGCGCG GGGGCCTTGG TCAATACATG GACGTCAGCG CCATGCCGGG CCACGAGTTC GACCTGCAGG CCATGTTCGA CCGGGGCGGT CACCCTGCGC GCGGGCGGCG CGGGGGGCAG GCCGGTGCAC CAACAACAAT TGCGCAGGAC GACGGCACGG CAATGCGGGT CAAAGGCAAG CAATTCGTGG CAGAGGGGCG GCGCGTCCAA ATGGCGTTCC CCGGGGGCGC AGGCTACGGA AACGCCGCTG ATCGTGACCC GGCTCTGGTC AAACGCGATC TGGCGCGCGG CTACATCAGC GCGGAAGAGG CGTCGCGTGA TTATGGGCTG TCGCCTAAGG ACATTGCGGG CGTGGCGGCG AGTGTCGCCA GAGGCGAAGA CATCTGA
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Protein sequence | MSASNDAGPG NVAYQVMWNR LISIVEEQAQ ALVRTAFSTS VREAGDLSAG VYDTHGRMLA QAVTGTPGHV NAMADAVPHF IRRIGRDTMT EGDVYITNDP WEGTGHLHDI TMVTPSFKDG ALVGFFACTA HVVDIGGRGF GADGQSVYEE GLYLPIMRFA ARGEVDETLI RIVRGNVREP DQLVGDMYAL ATCNEIGHRR LIDMMAEFTL SDLDGIAEFI LSNSRRATLE RINALPRKAA DGEMTVDGFD TPITLKARVS IEEDRIVTDF TGTSGIDKKG INCPMVYTKA YACYALKVAI APEIPNNAAS LAPFEVTAPE GTIVNAMHPA PVALRHIVGH FVPDVVFDAF DKIVPGLVPA EGAGCLCNFQ MSVRPTAPGG RRAEVLTFNS GGSGARPEVD GLNATAFPSG VMTMPIEATE HAGPVIIWRK ELRPGSGGAG RTRGGLGQYM DVSAMPGHEF DLQAMFDRGG HPARGRRGGQ AGAPTTIAQD DGTAMRVKGK QFVAEGRRVQ MAFPGGAGYG NAADRDPALV KRDLARGYIS AEEASRDYGL SPKDIAGVAA SVARGEDI
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