| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3785 |
|---|
| Symbol | |
|---|
| ID | 3936265 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 3869391 |
|---|
| End bp | 3869825 |
|---|
| Gene Length | 435 bp |
|---|
| Protein Length | 144 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637906163 |
|---|
| Product | putative tricarboxylic transport membrane protein |
|---|
| Protein accession | YP_511727 |
|---|
| Protein GI | 89056276 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATCA GGCTTGCGGG CGTCGCGATC TTCGTGATCG CGGCGCTCTA TGCCTGGACG
GCGCAGGATT ACACCGCCTC CTTCGGCGAT GTCCTTGGGC CCTCTGTCTT TCCGGTCATG
GTAGGGATCC CCGCCATGGC CCTCGCGCTT TCGCTGGTTG TGTTTCCCGG CGGAACCGTC
AGTTGGCCCG CACCCCGTCG CCTGCTGCGT CAGGGCCTCG CCATCGCGAC GTTGGTCGCC
TATTCGATCT TGCTCGAACC CCTGGGCTTC CCCTTGGCAA CTGCGGCGCT TGTCGCTGCC
ATCGCGATCA TCATGGACGG GCCCGTAGTG AAATCCGCGA TCATCGGCAT TGCCGGATCC
CTGTCCCTGT GGGTTTTGTT TGATCGGCTA CTGGGCTTGC CCATCGATTT TCTTGGCACC
CTATTCGACG GATAG
|
|---|
| Protein sequence | MSIRLAGVAI FVIAALYAWT AQDYTASFGD VLGPSVFPVM VGIPAMALAL SLVVFPGGTV
SWPAPRRLLR QGLAIATLVA YSILLEPLGF PLATAALVAA IAIIMDGPVV KSAIIGIAGS
LSLWVLFDRL LGLPIDFLGT LFDG
|
|---|
| |