Gene Jann_3716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3716 
Symbol 
ID3936196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3802403 
End bp3802762 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content59% 
IMG OID637906094 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_511658 
Protein GI89056207 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.762866 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTGA TCGTTTCAAG CAGTATCGGC GTGTTGACGG CGGGTGGGGT TTATCTGCTG 
CTGCGGCTCA GGACGTTCCC GGTGATCCTT GGGCTGGCGC TGCTGTCCTA TGCGGTGAAT
GTGTTCCTGT TCGCGAGCGG ACGGCTTGCC ATTGACCAAT CGCCCATTCT GTCCCGCTAT
GGCGAGGCGA GCTACACCGA CCCGTTGCCG CAAGCTTTGG TGCTCACCGC CATCGTGATT
TCTTTCGGGA TGACTGCCGT TCTGGTGATG ATCGGGCTTG GCGCTTATCT AGAATCGGAC
AGCGACCAAA TCGATATCGA GCCGGAAAAT GACGATCCCC GCGACGAGGG GGGCGCGTGA
 
Protein sequence
MELIVSSSIG VLTAGGVYLL LRLRTFPVIL GLALLSYAVN VFLFASGRLA IDQSPILSRY 
GEASYTDPLP QALVLTAIVI SFGMTAVLVM IGLGAYLESD SDQIDIEPEN DDPRDEGGA