| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3631 |
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| Symbol | |
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| ID | 3936109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3705325 |
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| End bp | 3706806 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637906007 |
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| Product | D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase |
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| Protein accession | YP_511573 |
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| Protein GI | 89056122 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.157483 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCCA GACGTCTCTT TTTGAGTGGG CTTCTTGCAA GCACCGCGCC CGGAGCATGG
GCCGCCGCGC CCGAACGCTC GCTGCGCCCG CTTGCGCGTC CGGCGGGGTT CTTGCTGCGC
ACCATCCCCG AAGCGGCCGA GATTATCCGC GATGCCGGTC TTGGCGGGCG GGTTGGATTT
GCCGTCGCGG ACGTCGCCAC CGGAGAGATC CTGGAGGTGG TCAACCCCCT CTACCCGCTG
CCACCCGCAT CGGTCGCCAA AACCGTAAGT TGCGCCTACG GGCTGGATCG TTTGGGGCCG
AATTATCGCT TCCGCACACG GCTTGTATCA AACGGGGTTC TGGCCGACGG ACGGCTGGAC
GGAGACCTGT GGCTGGTGGG CTCAGGCGAT CCGCTGTTTG ACACCGACGC GCTGGCCGCC
ATGGCCGATG ATCTGGTCAA TATGGGCCTG CGCGAGGTCA CGGGGCGGTT CATGGTCGCC
ACCGGCGCGC TGCCCGAGAT TTGGCAGATC GATCCCAGCC AGCTACCCCA TGTGGGGTAC
AACCCGGCCA TTTCTGCCCT GAACCTCAAC TTCAACCGGG TTCATTTTGA GTGGGAACGG
GTGGGCGAGG ATTATACGAT TTCCATGGAT GCGAGGTCTG CGTCCTTGCG ACCCGCGGTG
CAGGTCGCCC GCATGCGGGT GGAGGAGCGG ACAACACCGG TCTACACCTA TTCCGACGCC
GAAAGCCACG ACGCCTGGAC GGTGGCCCGG GGCGCGTTGG GCGATGCCGG ATCCCGCTGG
CTTCCGGTGC GCCGACCCGC CGCTTACATG GCCGAGGTGT TCCAGACATT GATGGGCCGC
CACGGCGTGC GCCTGCCGTC CCCGACCTAC GAATTGAGCG CGCCGGAGAC AGCTCTGGTG
CTGGCCGAAC ACGTCTCGGA CCCGCTGGAC GAGATCCTGC GCGGGATGAT GCGCTGGTCG
ACCAACCTGA CGGCGGAGGT AGTTGGGCTG ATGGCCACCC AGGCGACCGG GCAAAGCGCA
TCAAGCCTGC CCGAATCAGG CGCCGCGATG ACCGCCTGGA TGCAAGAGAC CCTGGGGGCC
CGCAACGCCA CCTTCGTCGA TCATTCCGGT CTGGGGGTCG GCAGCCGGAT CAGGCCCCAG
GACATGACCC ACGCGCTGGT CTCGGCAGGC TCCGACAGCC TTCTGCGGGA CCTGATGAAA
GACATCCCGA TGCGCGACCG GGACGGGAAC GTGATCCAGG GCCATCCGAT AGAGGTGGTT
GCCAAGACCG GCACGTTGGA TTTCGTTTCC GCCCTGGCGG GCTTTGCACG CATGCCCTCG
GGCCGCGATC TGGCATTTGC GATTTTCAGC GCTGATCTGG ACCGGCGGGA GGCCATCCCT
GACGATCAGC GGGAGCGGCC AACCGGCACG CGCACTTATA ACCGGGCCGC CAAACGCATG
CAGCAGGCGC TGATCGAGCG TTGGGGCGCC GTTTACGCAT GA
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| Protein sequence | MIPRRLFLSG LLASTAPGAW AAAPERSLRP LARPAGFLLR TIPEAAEIIR DAGLGGRVGF
AVADVATGEI LEVVNPLYPL PPASVAKTVS CAYGLDRLGP NYRFRTRLVS NGVLADGRLD
GDLWLVGSGD PLFDTDALAA MADDLVNMGL REVTGRFMVA TGALPEIWQI DPSQLPHVGY
NPAISALNLN FNRVHFEWER VGEDYTISMD ARSASLRPAV QVARMRVEER TTPVYTYSDA
ESHDAWTVAR GALGDAGSRW LPVRRPAAYM AEVFQTLMGR HGVRLPSPTY ELSAPETALV
LAEHVSDPLD EILRGMMRWS TNLTAEVVGL MATQATGQSA SSLPESGAAM TAWMQETLGA
RNATFVDHSG LGVGSRIRPQ DMTHALVSAG SDSLLRDLMK DIPMRDRDGN VIQGHPIEVV
AKTGTLDFVS ALAGFARMPS GRDLAFAIFS ADLDRREAIP DDQRERPTGT RTYNRAAKRM
QQALIERWGA VYA
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