| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3589 |
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| Symbol | |
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| ID | 3936064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3666152 |
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| End bp | 3667381 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905964 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_511531 |
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| Protein GI | 89056080 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0133] Tryptophan synthase beta chain |
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| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.738122 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACG ATCTATTGAA CAGCTTCATG ACGGGACCCG ATGAAAAGGG CCGGTTCGGT
GATTTCGGCG GGCGGTTTGT GTCGGAGACG CTGATGCCGC TGATCCTTGA GCTGGAGCAG
CAATATGAGC ACGCAAAGAC CGACGACAGC TTCTGGGCCG AGATGCAGGA CCTCTGGACC
CATTATGTGG GTCGCCCCTC TCCGCTCTAT TTCGCGAAAC GTCTGACCGA GCGTCTGGGC
GGCGCGAAGA TCTACCTCAA ACGCGATGAG CTGAACCACA CGGGCGCCCA CAAGATCAAC
AACGTGTTGG GCCAGATCAT CCTGGCGCGG CGCATGGGCA AGACCCGCAT TATTGCTGAG
ACAGGAGCGG GCCAGCACGG CGTGGCCACC GCCACGGTCT GCGCGAAGTT TGGCCTCAAA
TGCATCGTCT ACATGGGCGC GACGGATGTG GAGCGTCAGG CCCCCAACGT GTTCCGCATG
AAGCTTCTGG GCGCGGAGGT CGTACCGGTG ACCTCCGGGC GCGGCACACT CAAGGACGCG
ATGAACGACG CCCTGCGCGA CTGGGTCACC AACGTGCGCG ATACCTTCTA CTGCATCGGC
ACGGTCGCAG GTCCCCACCC CTACCCCGCC ATGGTCCGCG ATTTTCAGGC GATCATCGGC
AAGGAGACAC GCGACCAGAT GATGGCCGCA GAAGGCCGCC TGCCCGATAC GCTGATCGCC
GCCATCGGCG GTGGCTCCAA CGCCATGGGC CTGTTCTTCC CATTCCTGGA CGACAAGAGT
GTGAACATCA TCGGGGTGGA GGCCGGCGGC CACGGCGTCA ATGAGAAGAT GGAACATTGT
GCATCCCTGA CCGGGGGTCG CCCCGGCGTG CTGCACGGCA ATCGGACGTA TCTGTTGCAG
GATGAGGATG GACAGATCCT TGAAGGGCAT TCGATCTCGG CCGGTCTGGA TTATCCCGGG
ATCGGACCGG AGCACGCCTG GCTGCACGAG ATCGGGCGCG CGCAATATGT CTCCATCACG
GATCGGGAAG CGTTGGACGC CTTCCAGCTG TCATGCGAGA CTGAGGGTAT CATCCCGGCG
CTGGAACCGT CCCACGCGCT GGCCCACGTG TGCAAGATTG CGCCCGATAT GCCCCGCGAT
CATCTGCTGG TGATGAACAT GTGCGGACGC GGCGACAAGG ATATCTTCAC CGTCGCCCGG
GCCCTCGGCT GGGATATGGA CGGGGCCTGA
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| Protein sequence | MPDDLLNSFM TGPDEKGRFG DFGGRFVSET LMPLILELEQ QYEHAKTDDS FWAEMQDLWT
HYVGRPSPLY FAKRLTERLG GAKIYLKRDE LNHTGAHKIN NVLGQIILAR RMGKTRIIAE
TGAGQHGVAT ATVCAKFGLK CIVYMGATDV ERQAPNVFRM KLLGAEVVPV TSGRGTLKDA
MNDALRDWVT NVRDTFYCIG TVAGPHPYPA MVRDFQAIIG KETRDQMMAA EGRLPDTLIA
AIGGGSNAMG LFFPFLDDKS VNIIGVEAGG HGVNEKMEHC ASLTGGRPGV LHGNRTYLLQ
DEDGQILEGH SISAGLDYPG IGPEHAWLHE IGRAQYVSIT DREALDAFQL SCETEGIIPA
LEPSHALAHV CKIAPDMPRD HLLVMNMCGR GDKDIFTVAR ALGWDMDGA
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