Gene Jann_3579 details

Gene Information

• Locus tag: Jann_3579
• ID: 3936054
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 3655064
• End bp: 3655855
• Gene Length: 792 bp
• Protein Length: 263 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 637905954
• Product: hypothetical protein
• Protein accession: YP_511521
• Protein GI: 89056070

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.118586
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 23
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGCGAACA CTCCGCTTCT CATAACGCTT CTGCCGTCGT CCGGTGTGGA CCTCAGCCGC 
TGGCTCATGG CCCATTACGG CGTCACCTAT GAAGAACGCC CCCACGCGCC GATCTTCCAC 
GTCCTGGCCC TGAAGTCCTG GGGCGAAGGG AAAGACGGCT ACCCCCTATT CGTGCATGCC 
GACAGGACGA CCAAGACCGT CGGCTGCCGC AAGATCGCGG AGTTTTTCGA TCCCTCCGCG 
CCTGCTGACA AGACGCTGCT CCCTGATCCT GACGCAGAAC CGGAACTGGC CGCGCAGGTC 
GATGATATCG TCAAATATTC CTACTGGACC ATTGGCGGTG ATGTCGTGAA TTGGTCCTAT 
TGGAATTTCC TGAAATACAA ATGGGTCGTT TGGCCGTCCC TGACCACAAA AGTTCCCTGG 
TACGAGAAAC TCACTTGCCT TGTGGCATTT CGATTGATCC GGTTCCTGAT GTATAAGGGG 
CTGAAACTGG ACCAACGTGT TGCCGATGCA TCTTTGAAAG AGATCCTCGC GGGGTTCGAT 
AAGTTCGACG CGATGCTCGC TGACGGACGC CCTTATCTGA CGGGCGACCG CATGACCTAT 
GCGGATCTGG CCACCGCGGC GGCCCTGGGG CCCATGATCC TGGCGCAGGG ATACCATGGG 
ATGTTGCCCA ATCAGGCCAA ATGCCCGGTC TTCATGCAGG GCATTTATCA ACAGTTGCGC 
CAGCGCCCCA CCGGCCTTTT CATTCAGCGC ATGTATGATC AACACCGCCC TGCCCAATTG 
CTACAGATAT GA 

 

Protein sequence

MANTPLLITL LPSSGVDLSR WLMAHYGVTY EERPHAPIFH VLALKSWGEG KDGYPLFVHA 
DRTTKTVGCR KIAEFFDPSA PADKTLLPDP DAEPELAAQV DDIVKYSYWT IGGDVVNWSY 
WNFLKYKWVV WPSLTTKVPW YEKLTCLVAF RLIRFLMYKG LKLDQRVADA SLKEILAGFD 
KFDAMLADGR PYLTGDRMTY ADLATAAALG PMILAQGYHG MLPNQAKCPV FMQGIYQQLR 
QRPTGLFIQR MYDQHRPAQL LQI