Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3548 |
Symbol | |
ID | 3936023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3611201 |
End bp | 3612037 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637905923 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_511490 |
Protein GI | 89056039 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAAA TGATTGGAGC GGACCACAGG CGTTGGGCTT CGCTGCGACC CACCTTCCCC AACCCGGGCC GATACCGCGC GGCCAACGCA AACATGAGAC GGACGGACAT GAAGACGACG GATCAGACCA TTCTTGTTAC CGGCGCAAGT TCCGGGATCG GCGCAGTTTT GAGCACCAGT TTGGCTGCGG CGGGAAACCG CGTGATTGCC TGCGGTCGGC GCGAAGAACC ATTACACGAT CTTTCGGCGA AAAATGATGG CATCGGCTAT CGGCTGTGCG ACCTGCAGGA CAATGATGCG ATCAGAGAAC TTGCTGCGGA GCTTGGACCC CAGATCGATA TCCTGATCAA CTGCGCAGGC ATTTCTCAAG AGCTGTCGCT GACGGATCAG GGGGGTCTGG ATGCCCAGTT GAAGGAAGTG GACATCAATT TAAACGGCGT CATTCGGATG GTTCACGCGT TCCAACCGCA TCTCACGGAC AGAGGGGAGA CTGCCATCGT GAACGTATCA TCTGCGCTCG CCTTTGTTCC GGATGCAGCG CGTCCCATCT ACAGCGCGAC GAAGGCCGGT CTGCACGCCT ATACGCGCGC GCTCCGGCAT CAACTTGCTG GAACCGATGT GCGCGTGTTT GAACTGATGC CTCCGCTTAC AGACACCCCC ATGGCCGAAA ATGTTACCGA CGTGCCGAAA CTCTCGCCCG AGAAACTCGC GGAGATTTTC ATCAGAGATT TGCAACGAAA CACGCTTGAA ATCGCACCTG GGCTTAGCTC CACAGTGAGA TTGCTGTCCC GTCTCGCACC GGCCTTTTTG TTTCGAAAGC TCAACTATCA CAGATAA
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Protein sequence | MAQMIGADHR RWASLRPTFP NPGRYRAANA NMRRTDMKTT DQTILVTGAS SGIGAVLSTS LAAAGNRVIA CGRREEPLHD LSAKNDGIGY RLCDLQDNDA IRELAAELGP QIDILINCAG ISQELSLTDQ GGLDAQLKEV DINLNGVIRM VHAFQPHLTD RGETAIVNVS SALAFVPDAA RPIYSATKAG LHAYTRALRH QLAGTDVRVF ELMPPLTDTP MAENVTDVPK LSPEKLAEIF IRDLQRNTLE IAPGLSSTVR LLSRLAPAFL FRKLNYHR
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