Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3540 |
Symbol | |
ID | 3936015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3605094 |
End bp | 3605981 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637905915 |
Product | alpha/beta hydrolase |
Protein accession | YP_511482 |
Protein GI | 89056031 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.291632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.258269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCACAC CAGCAACAGG GACCTACGAT CTTCTGTTTA GGGAGGACGG ACGCCCTCTC GCATTTTCAG AGTTTGGCAG GCCTGATGGA TTTCCGGTTT TCTATTTTCA CGGGACACCA AGCTGCCGCG TTGAAGCGGG CTTTGCGGAT CAGGCCGCAC AGCATGCCGG ATTTCGCCTG ATCGCAACCG ACAGACCCGG TTTCGGCAGG TCCGGTTTTC AGAAGAACCG CAGATTCAGG GATTGGCCCG GCGACATTTT GGCTTTGGCC GATCACCTTG GCATCAACCA ATTCGGTCTG GCGGGCCACT CAGGTGCGGG TCCGCATCTT TTCGCGTGTG GCGTGTTTAT GAACCCCGAT CGCCTGAAAT TTATTGGCGC ACTTGGACCT TGGGGGCCCG TGGCATCACC GGAAATCATG TCAAGCCTCA ACCGCTTGGA TAAAGTATTC GCGCGACTGG CGCAAAAACT GCCTTGGGTG ATGCGGATCG GTTTCGCGCC GATGGGGTGG GCCGCGCGTT TTACGCCAAA CCTGTTTTTG GGGCTCCTCA AGAACTCCGT TTCTGCTGCG GATAAGGAAA TACTCGACAA CAAGGAAGTT GCTCAGCGCT TCCGGGAAAT GCAGCGTGAG GCGTTTCGCC AAGGAAGCCG AGGCGCTGCA CATGAAGCGT TCATTGCATA TTCCGATTGG GGATTTGACA TCTCGTCAGT GTGCGTACCC GTACATATCT GGCTAGGCGA CGAAGACATC TTCGTCACCC GCAAAATGGG TCAACATATT GCTGACACGA TACCAGGCGT GAAGTTTCAC TGGGTCGAGG GGGCTGGACA TCTGAATTTT GCCGACTGGA AGAGTATTTT TGCGTCATGT CGTCAACACA TCGCATGA
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Protein sequence | MVTPATGTYD LLFREDGRPL AFSEFGRPDG FPVFYFHGTP SCRVEAGFAD QAAQHAGFRL IATDRPGFGR SGFQKNRRFR DWPGDILALA DHLGINQFGL AGHSGAGPHL FACGVFMNPD RLKFIGALGP WGPVASPEIM SSLNRLDKVF ARLAQKLPWV MRIGFAPMGW AARFTPNLFL GLLKNSVSAA DKEILDNKEV AQRFREMQRE AFRQGSRGAA HEAFIAYSDW GFDISSVCVP VHIWLGDEDI FVTRKMGQHI ADTIPGVKFH WVEGAGHLNF ADWKSIFASC RQHIA
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