Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3514 |
Symbol | |
ID | 3935988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3570100 |
End bp | 3570897 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637905888 |
Product | hypothetical protein |
Protein accession | YP_511456 |
Protein GI | 89056005 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0771701 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000812749 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCAGCCA TGATCGCCAG CCTGATGATG TATCAGCGCC CTGAACTGGC TCAGGCCCAT GATCGCCTTT GGCTCGGCAT CCATGAGCGG CTGAGGAGCG CTGGGATCCA CGCGCCAGAT GCGTTGTCGC AAGACGCGGA GGAGTTTTTC GTCTGGCGTC ATCCCGGCCT CATTCTCAGC CAAACCTGCG GGATGCCATA CCGCCTTTGG CTCCATGATC AGGTCGCGTT GGTGGGCACG CCCGATTATG GTGTGCAGGG TTGTCCGCCC GGCTACTACC GCAGCGCCAT GATTGTCCGC GCGGATGACA CGCGCGATAC CGTTGCCGCG TTCAAGGATG CGCGCTTCGC TTATAATCAG ACCTTCTCGC AATCCGGCTT TGCGTCACCC CACAGGCATG TGACGCCGCT TAGGTTTTTC TTCGAGACCC GCATTCAAAC CGGCGCGCAT ACGGCGTCTG CCCGCGCCGT GGCGGATGGG ACAGCGGATA TCGCGGCGCT GGATGCCGTC ACGTGGCGCA ATCTTCAACG GTTTGAAGCG TTCGCGAAGG AGCTGCGCGT CCTTGACTGG ACCTCACCCA CTCCCGGCCT GCCGCTGATC ACCGCCAAGG GCAACGATAC CGAGGTGATT TTTGCAGCGG TCGAAGGTGC TATCGGCGCG ATGGGTCCTG AAGACAGGGC GGTGCTTGGG TTGCAGGGTC TGATCCGGAT CCCCAAAGCG GCTTACCTGA ACGTCCCAAA CCCTGATGCG GCCCTCATCG ACGCCGTTTC ACCGGCGGCC TCAAAGGTCG ATCCGTAA
|
Protein sequence | MSAMIASLMM YQRPELAQAH DRLWLGIHER LRSAGIHAPD ALSQDAEEFF VWRHPGLILS QTCGMPYRLW LHDQVALVGT PDYGVQGCPP GYYRSAMIVR ADDTRDTVAA FKDARFAYNQ TFSQSGFASP HRHVTPLRFF FETRIQTGAH TASARAVADG TADIAALDAV TWRNLQRFEA FAKELRVLDW TSPTPGLPLI TAKGNDTEVI FAAVEGAIGA MGPEDRAVLG LQGLIRIPKA AYLNVPNPDA ALIDAVSPAA SKVDP
|
| |