Gene Jann_3514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3514 
Symbol 
ID3935988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3570100 
End bp3570897 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content62% 
IMG OID637905888 
Producthypothetical protein 
Protein accessionYP_511456 
Protein GI89056005 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0771701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000812749 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGCCA TGATCGCCAG CCTGATGATG TATCAGCGCC CTGAACTGGC TCAGGCCCAT 
GATCGCCTTT GGCTCGGCAT CCATGAGCGG CTGAGGAGCG CTGGGATCCA CGCGCCAGAT
GCGTTGTCGC AAGACGCGGA GGAGTTTTTC GTCTGGCGTC ATCCCGGCCT CATTCTCAGC
CAAACCTGCG GGATGCCATA CCGCCTTTGG CTCCATGATC AGGTCGCGTT GGTGGGCACG
CCCGATTATG GTGTGCAGGG TTGTCCGCCC GGCTACTACC GCAGCGCCAT GATTGTCCGC
GCGGATGACA CGCGCGATAC CGTTGCCGCG TTCAAGGATG CGCGCTTCGC TTATAATCAG
ACCTTCTCGC AATCCGGCTT TGCGTCACCC CACAGGCATG TGACGCCGCT TAGGTTTTTC
TTCGAGACCC GCATTCAAAC CGGCGCGCAT ACGGCGTCTG CCCGCGCCGT GGCGGATGGG
ACAGCGGATA TCGCGGCGCT GGATGCCGTC ACGTGGCGCA ATCTTCAACG GTTTGAAGCG
TTCGCGAAGG AGCTGCGCGT CCTTGACTGG ACCTCACCCA CTCCCGGCCT GCCGCTGATC
ACCGCCAAGG GCAACGATAC CGAGGTGATT TTTGCAGCGG TCGAAGGTGC TATCGGCGCG
ATGGGTCCTG AAGACAGGGC GGTGCTTGGG TTGCAGGGTC TGATCCGGAT CCCCAAAGCG
GCTTACCTGA ACGTCCCAAA CCCTGATGCG GCCCTCATCG ACGCCGTTTC ACCGGCGGCC
TCAAAGGTCG ATCCGTAA
 
Protein sequence
MSAMIASLMM YQRPELAQAH DRLWLGIHER LRSAGIHAPD ALSQDAEEFF VWRHPGLILS 
QTCGMPYRLW LHDQVALVGT PDYGVQGCPP GYYRSAMIVR ADDTRDTVAA FKDARFAYNQ
TFSQSGFASP HRHVTPLRFF FETRIQTGAH TASARAVADG TADIAALDAV TWRNLQRFEA
FAKELRVLDW TSPTPGLPLI TAKGNDTEVI FAAVEGAIGA MGPEDRAVLG LQGLIRIPKA
AYLNVPNPDA ALIDAVSPAA SKVDP