| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3491 |
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| Symbol | |
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| ID | 3935965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3544724 |
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| End bp | 3545383 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905865 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_511433 |
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| Protein GI | 89055982 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0557217 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTTC TGTTGGTCGA AGATAATGCG GAACTAGCGG ATTCAGTCGT GCAGCGGCTG
GGGCTGGACG GCCACGCCGT CGACCACGCA GGCACGCTGG CCGAGGCGGA GGATTGCCTG
GCCGTCGCCG AATACGACCT GATCCTGCTG GACGTGATGC TGCCCGACGG CGACGGGCGC
GACAGGCTGG CCACCTGGCG GGGGCGCTTG GAGACGCCGG TGATCGTGCT GACCGCGCGC
AGCCAGATCA GTGACCGGGT GGGCGCGCTG GATCAGGGCG CCGATGACTA CCTGACCAAG
CCGTTTGATT TCAGCGAGTT GGAGGCGCGG TGCCGCGCGG TCCTGCGCCG TCGCGGCGGC
GCTGCGAAGA ATGAGGTTAC TCTTGGCGAC GCAGTCTTTG ACCCCACCGC AGGGACCCTG
CGCGCGGGCG AACAGGTCGT GGACCTGCGC AACCGGGAGA TCCGGCTGTT GGAGGTCTTC
GCGCGCAACC CCGGCCATAT CCTGTCCAAA TCCCAGCTGA TGGATCGGCT GTTTTCCCAT
GACGCAGACG TCACCGAGAA TGCGATTGAG GTCTATGTCG GGCGTTTGCG GCGCAAGCTG
GACGAGGTCG GCGTGAAGAT CGAAACGGTG CGCGGGGCGG GCTACCGGAT CAGCCGATGA
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| Protein sequence | MRFLLVEDNA ELADSVVQRL GLDGHAVDHA GTLAEAEDCL AVAEYDLILL DVMLPDGDGR
DRLATWRGRL ETPVIVLTAR SQISDRVGAL DQGADDYLTK PFDFSELEAR CRAVLRRRGG
AAKNEVTLGD AVFDPTAGTL RAGEQVVDLR NREIRLLEVF ARNPGHILSK SQLMDRLFSH
DADVTENAIE VYVGRLRRKL DEVGVKIETV RGAGYRISR
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