| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3458 |
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| Symbol | |
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| ID | 3935932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3504069 |
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| End bp | 3506465 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637905832 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_511400 |
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| Protein GI | 89055949 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACTTGC CCATCGACGC CATCCTCCCA GACCTGGTGT CAGCTTTGCA GAAGGCTGGC
CGCGCGGTCC TGCAAGCCCC ACCGGGGGCG GGTAAAACCA CGCGCGTGCC CTTGGCGTTG
CTGCCTGAGG TGTCAGGCAA GATCCTGATG CTGGAGCCCC GCCGCCTCGC CGCACGGGCC
GCCGCGGAAC GGATGGCACA GACTTTGGAG GAGGAGGTGG GCCAGACCGT TGGCTACCGC
GTGCGCGGCG ACAGCACGAC CGGCTCCAAC ACCCGGATCG AGGTTGTGAC CGAAGGCATC
CTGACACGAA TGCTCCAGGA CAACCCGGAA TTGCCGGGCG TGGGCGCGGT CATCTTCGAC
GAATTCCACG AACGGTCGCT GAACGCCGAT CTTGGCCTTG CATTGACGTG GGAAGTGCGC
GGCGCGCTGC GGGAGGATCT GTGGCTGATC GTGATGTCCG CCACCTTGGA CGCGGCCCCC
GTGGCGGCCC TTCTGGACGA TGCGCCGCTG ATCTCATCGG AGGGCCGCGC CTTCCCGGTG
GAGACCCGCT GGCTGGACAA ACCACCCCAC CGCGATGCGC GATTTGAGAC GTCCGTTGCC
GATCTGGTCG TGCAAGCGAT AGGGGATGTT CCGGGCGGCT GCCTGGTTTT CCTGCCCGGA
GAGGGGGAAA TCCGCCGGGT GGAGACGGCC TTGCGCGGGC GCTTGCCCGG GGACGTTGTT
GTCAGGCCGC TTTTTGGTGC AATGACGCTG ACCGATCAGC GCGCCGCGAT CCGGCCAGAA
GCACGGGGCC GCAAACTGGT GCTCGCTACG TCGATTGCTG AAACCTCGCT GACCATCGAA
GATATCCGGG TCGTCGTCGA CGCAGGCCGC GCGCGGCGGG CGCGGTTTGA TCCCGGCTCT
GGCATGACGC GGCTGGTGAC GGAGCCGGTC AGCCGGGCGG AGGCCGCTCA ACGGCAGGGC
CGCGCCGGGC GTGTGGCCGA GGGGGTATGC TACCGGATGT GGACCAAAGG GGCCGAGGGC
GCGTTGCCCG CCTTCCCCCC GGCTGAGATC GAGGCGGCAG ACCTCACCTC GCTCGCGTTG
GAACTGGCGG TCTGGGGCAG CGGGGAGGGC CTCGCGTTTC TGACCCCGCC CCCCGACGCG
GCCATGGCCG AGGCGCGCGG GCTGTTGCAC GCCCTCGGCG CGTTGAAAGA TGGCACCATC
ACGCCCCATG GGCGCACACT CGCCCGCCTG CCCCTGCATC CGCGACTGGC GCATGTGGTG
ACGCAGGGCG GCCCTGGTGC GGCCCGGCTC GCCGCACTGT TGGCCGAGCG CGACCCGTTG
CGTAGGCACG GCGCGGACTT GACGCTGCGC CTGCGGGCGT TAGACGGACG CGGGGGCGAT
CCCGGTGTAG TGGCCCGCAT CCGGCAGGAA ACAAAGCGCC TGAAGCGGTT TGAAGGCGGC
GCGGCGCACA GCCCCGGTGC GCAGGCGGCA CTGGCCTACC CGGACCGTAT CGGGCTGCGC
CGTGCGGGGA AACAACCCCG CTACGTGCTC TCCGGCGGCA AGGGCGCGGT CATGCCCGAT
GGCGACACGC TCAGTGGGGC GCGGTTGATC GTCGCCACAG ATCTGGACGG CAACCCGCGC
GAGGCCCGCA TCCGCATGGG GGTGGAGGTG TCCGAGACGG ACATCCGCGC GCTCTATGGC
GACCAGATCA CGTGGCAGAC CGTCTGCGCC TGGTCGAGGC GTCACCGGCG GGTGGAGGCG
CGCCAGCAGG AACGTCTCGG CGCGCTGGTG CTGGACGACC GGATCTGGCG GGATGCGCCG
CCGGAGGCCA TGGGTGACGC GATCCTTGAT GGCATCCGCG ACCTCGGCCT TGACGCGTTG
GGCTGGTCCA AACGGGCCCG TCTCCTGCGC GCGCGGGTGG CCTTCTCCGG CGTAACGGAC
GTCTCGGACG ACACGCTCCT CAGCGCGCTG CCCGACTGGG CCGCCCCCTT CCTCGCCGGA
GCGCGCTCTG CCGATGATCT GTCGCGCTTT GACCCGGCCC CGGCACTGGA GGCCTGGCTG
GGACGGGACT CGCTGCAAGA GGTGTCCCGC CTCGCGCCGG ACGCCTGGAC CACGCCGATG
AACCGCAAGG TCCCGATTGA TTATTCCAGC GACCAGCCCG AAGTGTCGCT TCGCCTGCAA
GAGGTTTTCG GCACGACGCA ACATCCCCTC ATTGGGCCCG ACCACCTGCC GTTGAAGGTC
ACGCTGCTGT CGCCCGCGCA ACGGCCCGTG CAAGTCACCA CCGATCTGCC GGGGTTCTGG
GATGGCTCCT ACGCCGATGT TCGCAAGGAC ATGCGCGCCC GCTATCCGCG CCACCCGTGG
CCAGAGGATC CGCGGGCCTC AGACCCGACG CTTCGGGTCA AACCACGGGG AAAGTAG
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| Protein sequence | MDLPIDAILP DLVSALQKAG RAVLQAPPGA GKTTRVPLAL LPEVSGKILM LEPRRLAARA
AAERMAQTLE EEVGQTVGYR VRGDSTTGSN TRIEVVTEGI LTRMLQDNPE LPGVGAVIFD
EFHERSLNAD LGLALTWEVR GALREDLWLI VMSATLDAAP VAALLDDAPL ISSEGRAFPV
ETRWLDKPPH RDARFETSVA DLVVQAIGDV PGGCLVFLPG EGEIRRVETA LRGRLPGDVV
VRPLFGAMTL TDQRAAIRPE ARGRKLVLAT SIAETSLTIE DIRVVVDAGR ARRARFDPGS
GMTRLVTEPV SRAEAAQRQG RAGRVAEGVC YRMWTKGAEG ALPAFPPAEI EAADLTSLAL
ELAVWGSGEG LAFLTPPPDA AMAEARGLLH ALGALKDGTI TPHGRTLARL PLHPRLAHVV
TQGGPGAARL AALLAERDPL RRHGADLTLR LRALDGRGGD PGVVARIRQE TKRLKRFEGG
AAHSPGAQAA LAYPDRIGLR RAGKQPRYVL SGGKGAVMPD GDTLSGARLI VATDLDGNPR
EARIRMGVEV SETDIRALYG DQITWQTVCA WSRRHRRVEA RQQERLGALV LDDRIWRDAP
PEAMGDAILD GIRDLGLDAL GWSKRARLLR ARVAFSGVTD VSDDTLLSAL PDWAAPFLAG
ARSADDLSRF DPAPALEAWL GRDSLQEVSR LAPDAWTTPM NRKVPIDYSS DQPEVSLRLQ
EVFGTTQHPL IGPDHLPLKV TLLSPAQRPV QVTTDLPGFW DGSYADVRKD MRARYPRHPW
PEDPRASDPT LRVKPRGK
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