Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3411 |
Symbol | |
ID | 3935885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3460061 |
End bp | 3460837 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637905785 |
Product | periplasmic protein-like |
Protein accession | YP_511353 |
Protein GI | 89055902 |
COG category | [S] Function unknown |
COG ID | [COG3904] Predicted periplasmic protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.456273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.679918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA CGGCACCGCG CGGGCTGACG GTCAAACGCG CGATCACGGC GATCCTCGCG TTCCAGATCG CCATGGCGGT GGTCCTTGCG GGTTCTGACC TTATCAGCGC CCTGCCCCGG CTTTTGTCAG GCGTCAACGC GCCGCAGCTG GATGCGCCCG TAGCGCCCGG CGATCAGGTC CGCCGCTACC GCCCCGGCGA CCTGCCCGCC CGTGCGCCGC GCGACACGGA CCGCCAATCG CCCATCCCCG ATCCCGGCGA CATGCCATCG CGCCTGCGCT TCTCGGTGGA TGGTGACGTG GCGCTGGTCA CCGGCCAGAT CGCGCCCGGC GATGCGGTGC GGTTCGCCGA ATGGCTTGAG GATGCGGAGA CGTTTGACAG CATCCGCCTC CACTCCCCCG GCGGGTCCGT TATGGATGCG CTGGCAATTG GTCGGTCGAT CCGCGAGGCC GAATTGTCGA CCTTGATGGA GGCGGGCGAC ATCTGCCTGT CGGCCTGCCC CTACGTTCTT GTGGGCGGCA CGACCCGCAA TGTGTCCGAC GATGCCATGG TTGGCGTGCA CCAGCATTAC TTCGGCGAAA ACACCGCCCT TCCGGCCTTT CTGGCGATTG AAGACATCCA GTTTGGTCAG GGTCAGGTCA TGGCCCATCT TGATGCCATG GGAATCGACG TCCGCCTGAT GCAACACGCG CTGATCACCC CGCCCGAGGC GATTTACGTG CTGCTGCCCG ATGAGCTTGC GGAGTATGGC GTGACCATGG CGGAGGACGA CGCCTAG
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Protein sequence | MTETAPRGLT VKRAITAILA FQIAMAVVLA GSDLISALPR LLSGVNAPQL DAPVAPGDQV RRYRPGDLPA RAPRDTDRQS PIPDPGDMPS RLRFSVDGDV ALVTGQIAPG DAVRFAEWLE DAETFDSIRL HSPGGSVMDA LAIGRSIREA ELSTLMEAGD ICLSACPYVL VGGTTRNVSD DAMVGVHQHY FGENTALPAF LAIEDIQFGQ GQVMAHLDAM GIDVRLMQHA LITPPEAIYV LLPDELAEYG VTMAEDDA
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