Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3381 |
Symbol | |
ID | 3935854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3434088 |
End bp | 3435863 |
Gene Length | 1776 bp |
Protein Length | 591 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637905754 |
Product | TrkA-like |
Protein accession | YP_511323 |
Protein GI | 89055872 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACCCG ATCAAATCAT CCTCTTCTCT CTTTTTGGCG CGGTCTTTGG CCTGCTTCTC TGGGGTCGTT TCCGCTATGA TCTTGTGGCG TTCTCTGCCC TCATGGTGGG CACGGTTCTG GGCGTTGTGC CCACATCGGA CGCCTTCGCG GGCTTCGGCC ACCCCGCCGT TCTGGTGGTG GCGCTGGTCC TTGTTGTCTC GGCAGGTCTG GTGCGATCCG GCGCGGTGTT CCTGATCACC CGCACGCTGG TGGACGCGTC ACGGTCCCTC GGCGCGCATA TCACGATCAT GGGGGCCATT GGCGGCGCTC TCTCGGCATT CATGAACAAC GTGGCCGCGC TGGCGCTGCT GATGCCCGTC GATATCGCAA CGGCGCGCAA GGCGGGTCGC GCGCCGGGCG TGTCGCTGAT GCCGCTGTCA TTCTGCACAA TCCTGGGCGG CATGGTCACG CTGATCGGCA CGCCACCCAA TATCATCATC GCCACGATCC GGGAGGATCA GTTGGGTGAG CCCTTTCGCA TGTTTGATTT TGCCCCCGTC GGCGGGGTGG CCGCCATTGC GGGTCTGGCT TTCGTCGCGC TGATCGGTTG GCGGCTCATC CCGGTACGTG ATAGCGGCGT TGGCGGCGAC CAGCTAAAAG CGCTTGCGCC ATATCTCGCA GAATTGCGCG TGCCTGAAGG CTCCAAACTC GACGGCACCC GCCTGCGCGA TCTGCAAGCG GGCGCAGAGG AGGCTGACGT CGCCATCCTC GGCATCCTGC GCGACGGCAA ACGCCGCTTT GGGACAGGCC GCAACCTGAC ATTGCGCGAA GGGGACGTGC TGGTGCTGGA GGCCGCGCCG GAGGCCTTGG ACGAATTCCG CGTGGGCCAG AATTTGGAGA CGGCCGGCAG CGACACAGCC ACCGAAAACG CCACCGGCGA CGGCGTCTCT TTCATCGAGA TGGTTGTGCC CGACGATGCC CGCATCGCAG GCAAGACCGT CGAAAGCGTG GGCCTTGCCT GGCGTCACCG CACCACGTTG ATGGGGATTG CGCGCAAGGG CACGCGGATC ACCAAGCGGC TGCGCAAGAC CTTGGTGCAG CCGGGTGATA TCCTGCTGCT GCTGGCCCCC AGCGACAGCG CCGATGATGT CGTCAGCTGG CTTGGCGGCC TCACGCTTGC GGATCGGGGT CTGACGGTCA CGAACGACAG CAAGACCTGG GCGGCCATCG GCCTTTTTGC TGCCGCCGTC CTCGCCGCGT CTCTGGGCAT CGTCTACCTG CCCATCGCGC TTGGCATCGT CGCGGTGGGC TATGTGCTGC TGAAAATCCT GCCCATTGCG GAGATTTACG ACCACATCGA ATGGCCGGTC GTGGTCCTGC TGGGGTCGAT GATCCCCCTT GGCGCGGCGC TCGACAGTTC CGGCGGGACC GAGCTGATCG CGAATTCCCT CGTAGCCCTC ACGGATGGTC TGCCAGCCTG GGCGATCCTG ACCGTGCTGA TGGTCGTCAC CATGACGATG TCGGATGTCC TCAACAACAC TGCCACGGCC ATTGTTGCGG CACCGGTGGG CATCACCATG GCGCAGTCCC TGGGTGTGTC GCCGGATCCG TTTCTGATGA CCGTCGCTGT CGCCGCGTCG GCCGCGTTCC TCACGCCGAT TGGCCACAAG AACAACACGC TGATCCTGGG GCCGGGCGGC TACGGCTTCG GCGATTACTG GCGCATGGGC CTGCCGTTGG AGGTCATCGT GGTTGCCGTT TCCATCCCCA CGATCCTGCT GGTCTGGCCC CTTTGA
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Protein sequence | MTPDQIILFS LFGAVFGLLL WGRFRYDLVA FSALMVGTVL GVVPTSDAFA GFGHPAVLVV ALVLVVSAGL VRSGAVFLIT RTLVDASRSL GAHITIMGAI GGALSAFMNN VAALALLMPV DIATARKAGR APGVSLMPLS FCTILGGMVT LIGTPPNIII ATIREDQLGE PFRMFDFAPV GGVAAIAGLA FVALIGWRLI PVRDSGVGGD QLKALAPYLA ELRVPEGSKL DGTRLRDLQA GAEEADVAIL GILRDGKRRF GTGRNLTLRE GDVLVLEAAP EALDEFRVGQ NLETAGSDTA TENATGDGVS FIEMVVPDDA RIAGKTVESV GLAWRHRTTL MGIARKGTRI TKRLRKTLVQ PGDILLLLAP SDSADDVVSW LGGLTLADRG LTVTNDSKTW AAIGLFAAAV LAASLGIVYL PIALGIVAVG YVLLKILPIA EIYDHIEWPV VVLLGSMIPL GAALDSSGGT ELIANSLVAL TDGLPAWAIL TVLMVVTMTM SDVLNNTATA IVAAPVGITM AQSLGVSPDP FLMTVAVAAS AAFLTPIGHK NNTLILGPGG YGFGDYWRMG LPLEVIVVAV SIPTILLVWP L
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