Gene Jann_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3339 
Symbol 
ID3935812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3390272 
End bp3391297 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID637905712 
Producthypothetical protein 
Protein accessionYP_511281 
Protein GI89055830 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.388274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCC GACAGCGACT GCTTCAATAC ATCGACCGCG ACAAGATGGG CATCGAAGTT 
GCGCCCTATT TCACGCCCCT GGTGCCCAAA GCTGACGGGT TCAAGGTGCT GACACTGGAC
GTGTTCGACA CCGACCGCCT GCGGGAAAAT GCAAGACAGG ACGCCGGTAT TTCCGACGAT
GGCGTAGCGC GGATCGAACC GGTGGATCTT GTCGGTGACG CGTCCTCTAT CGCTGATCTT
GTCAGCGCCT CGCCCCATGC GGGCAACATC CATTACATCG TGTCATCCCA TAATTTTGAA
CATCTGCCCA ACCCCCTCAA GTTCCTGCGT GGCTGTGCAG ACCTGCTGTC CCCCGGCGGC
GTGCTCAGCA TGGCTGTGCC GGACGGACGG GCCTGTTTCG ACCATTTCCG CATGCCCACG
CGCCTGTCCG ATTGGCTGGA TGCGTTCCAC GAAGATCGCA CCCAACCCTC CGCCGGGACG
CTCTTTGATT ATCACGCGTT CCATGCCGCC TACATGCGCG ACGGGCAGCC TGCGGTCGGG
TGCGTGTGGG AGGTGGATGA TCCATGTAAG TTCGCCCCGC AAGAGAACGT GCAAGGCGCG
CTTGACCTCT ACCATGGTGC GCGGCAGCCC GGTGCGGATT ACCGCGACGC CCACTGCTCC
GTGGTCTTCC CCGAGACGAT GCGTTTGATG CTTGCGGACC TTATTTTCCT TGGCCTGCTG
GATCTGGAGG TGATCGCGGT GGAGCCGACA CAGGGCCTCG AATTCTTTAT CCATCTGCGC
AAGCCGGTGC AGCCAAGTGT CACCGAGACC GCCGCTTTCT ACGCTCGCCG GAAAAATCTG
CTGCGCGATG TGGCGGTGGC GATGGGCAAG GGCGGGACCC GTGCCACCAC ACGCCGTCCG
CTGCACACGT TGGCCCACCG GTTAGAGGTG GGCAGCAAAT CAACCCTAAA ACGGTTGGTC
GGCACCGATC GGTTTCAGCG CCTGGATGAC TGGCACAAAC GCACTGTCCG TGACCGCCGT
CGGTGA
 
Protein sequence
MNRRQRLLQY IDRDKMGIEV APYFTPLVPK ADGFKVLTLD VFDTDRLREN ARQDAGISDD 
GVARIEPVDL VGDASSIADL VSASPHAGNI HYIVSSHNFE HLPNPLKFLR GCADLLSPGG
VLSMAVPDGR ACFDHFRMPT RLSDWLDAFH EDRTQPSAGT LFDYHAFHAA YMRDGQPAVG
CVWEVDDPCK FAPQENVQGA LDLYHGARQP GADYRDAHCS VVFPETMRLM LADLIFLGLL
DLEVIAVEPT QGLEFFIHLR KPVQPSVTET AAFYARRKNL LRDVAVAMGK GGTRATTRRP
LHTLAHRLEV GSKSTLKRLV GTDRFQRLDD WHKRTVRDRR R