| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3304 |
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| Symbol | |
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| ID | 3935777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3358334 |
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| End bp | 3360373 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905677 |
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| Product | sodium/hydrogen exchanger |
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| Protein accession | YP_511246 |
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| Protein GI | 89055795 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
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| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0626661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.119921 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTAA CGCCGCGCCG CAACACCCGC TACACTCGCC GCACTCCCAC CCCAAACCGG
AACAGGTCCA TGGACGAAGC CCTTCTCCAG ATCACCATCT ACCTGACCGC CATGCTGATC
GCTGTCCCGA TCTCCATTCG CTTTGGTCTG GGCTCTGTCC TTGGCTACCT GCTGGCGGGC
ATCGCCATCG GTCCGGTTCT GGGCCTTGTC GGATCGGAAA CGCAAGACCT TCAGCATTAC
GCGGAATTCG GCGTTGTCCT GATGCTGTTT CTCATCGGGC TGGAGTTGGA CCCCCGGACG
CTGTGGGACA TGCGCAAGCG GCTGGTCGGG CTTGGGGGCA GTCAGATTCT GCTGTCGACC
GCCATCCTGA CCGGCGGCGC GATGATCCTG GGCCTTTCCA CGTCGCTTTC TCTGGCCATC
GGGATCACGC TGGCGCTCAG CTCGACGGCT ATCGTGCTGA CAACATTGTC GGAAAAAGGG
CTGATGGGAA CGACCGGCGG GCGGGGGGCG TTCTCGGTTC TGCTCACCCA GGACATCGCC
GTGATCCCGG CGCTGGCCCT TCTTCCGCTG CTGGCGACGG GCGCGGGCAT ACGCTTCACG
GAAGACGGCG CGATTGAGCG GACGGCGGAG GACGCGCATC ATTCGCTGTC CCTGGTCGAG
GGGTTGCCCG CATGGGGTGT CACGCTGGTC ACCATTGCGG CTGTGATCGC GGTGATTCTG
GCGGGGCGCT ACCTCTCGCC CTTCGTGTTC CGCGTGATCC ACAACGCGAA ACTGAAGGAA
CTCTATACCG TCGCCGCCCT CGCCTTTGTG GTGGGCATCG CAGAGCTGAT GATCCTCGTG
GGTCTCTCGC CCGCGCTCGG CGCATTCCTT GCGGGTGTGG TTCTGGCCAA TTCCGAGTTC
AAGCATGAGC TGGAGGCGGA TATCGAGCCG TTCAAGGGCC TTCTCCTTGG CCTCTTTTTC
ATCACGGTCG GTGCGGGCAT CAACTTTGCC ACGCTGTTTG CCAACCCGTT CCTGATCATC
GGCCTGACCC TTGCCATCAT GGTGATCAAA GGTGTCGTTC TCTATGCCAT CGCGCGGGTC
ACGCGGATGG AGGGGCGGGA CCGCTGGCTC TTTACCCTCA GCCTCGCGCA GGCCGGGGAG
TTCGGCTTCG TGCTGGTGGC GTTCGGCGTC AGCCAAGCGG TTTTCCCGAC TTATATCGCC
CAGATCCTTT TGCTGGTCGT GGCGCTGTCG ATGTTGTTGA CCCCGCTCAG TTTTATTCTC
TACGAGGCCA TTGGGGCGCG GCTCGGCACC GGCGTGGAGG ACGCGCCCGA GCATGATGAA
ATTGATGAGG AGGCCCCCGT CATCATCGCC GGTATCGGGC GGTTCGGGCA GTCGGTCCAC
CGGATGGTGC GGGCGTCGGG CTTCAAGACG GTGGTGCTTG ATTCGAACCT GGAGACGATC
CAGCTGATGC GCCGGTTCGG CCTCAAGAGC TTCTTTGGCG ACCCCACCCG GCCCGAACTT
CTGAAAGCCG CGGGCCTCGA CAAGGCGCGG GTCCTTGTCG TCTGCGTCGA TAACAAACAG
GCCGCCGTCA AGCTGGTGCG CTATGCCAAA CGGACGCGGC CTGACATCTC GGTCGTGGCC
CGCGCCCATG ATCTGCTCCA CGTCTATGAG CTGTACGCAG CCGGCGCTGA CCACATCATC
CGAGAGGTCT TCGACAGTTC CCTACGCGCC GCGCGCTATG TGCTGGAGGA TATGGGCCTG
TCGGATTACG AGGCCCACGC GATGGAAATC GCCTTTTATC GCCATGATCG CCACAACCTG
CGCGCCCTGG CCGAGGTCTG GAAGCCCGGC ATTCCGGTGA CCGAGAATGA AGACTACATG
CGCCTGACCC GCGAGATGGC GGACAACCTT GAAAGCGCGG TGATGACCCA TCTCGACGCG
ATGGAGGATG AAGGGGGAGG CTCGACGGCC CATACCCGTG GCGATGTCGG CGCGCTCAGC
GGGATCAGCC GCACGCCGGG CGGCACACCG CGCCGCCCCG ATGGCAAGGC AGACGGCTAG
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| Protein sequence | MPLTPRRNTR YTRRTPTPNR NRSMDEALLQ ITIYLTAMLI AVPISIRFGL GSVLGYLLAG
IAIGPVLGLV GSETQDLQHY AEFGVVLMLF LIGLELDPRT LWDMRKRLVG LGGSQILLST
AILTGGAMIL GLSTSLSLAI GITLALSSTA IVLTTLSEKG LMGTTGGRGA FSVLLTQDIA
VIPALALLPL LATGAGIRFT EDGAIERTAE DAHHSLSLVE GLPAWGVTLV TIAAVIAVIL
AGRYLSPFVF RVIHNAKLKE LYTVAALAFV VGIAELMILV GLSPALGAFL AGVVLANSEF
KHELEADIEP FKGLLLGLFF ITVGAGINFA TLFANPFLII GLTLAIMVIK GVVLYAIARV
TRMEGRDRWL FTLSLAQAGE FGFVLVAFGV SQAVFPTYIA QILLLVVALS MLLTPLSFIL
YEAIGARLGT GVEDAPEHDE IDEEAPVIIA GIGRFGQSVH RMVRASGFKT VVLDSNLETI
QLMRRFGLKS FFGDPTRPEL LKAAGLDKAR VLVVCVDNKQ AAVKLVRYAK RTRPDISVVA
RAHDLLHVYE LYAAGADHII REVFDSSLRA ARYVLEDMGL SDYEAHAMEI AFYRHDRHNL
RALAEVWKPG IPVTENEDYM RLTREMADNL ESAVMTHLDA MEDEGGGSTA HTRGDVGALS
GISRTPGGTP RRPDGKADG
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