| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3293 |
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| Symbol | |
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| ID | 3935766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3347023 |
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| End bp | 3348279 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905666 |
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| Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like |
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| Protein accession | YP_511235 |
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| Protein GI | 89055784 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.446836 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG ATACCTCCGC GGCGGCGCGC AAGCTGGTCG AGGTGCGCAA CCTGCGCATG
TATTTCCCGA TCCGCACCGG GCTGCTGCGC CGGCACACCG GCGATGTGAA AGCCGTCGAT
GGGGTGAACT TCGATATCTA TGAGGGCGAA ACCCTTGGTC TTGTGGGCGA AAGCGGGTGT
GGAAAGTCCA CCTGTGGCCG CGCGGTTATC CGGCTCTATG AGCCCACCGA TGGCTCCATC
CAGCTGGAAA ACAAGGAGCT TGCCTGGTCC AACATCAAGG CCCGCGACAT TGCGCAGCGG
GCCGAACGCG TCGCCTCGGT GGTCTTCTTC GTGGCCTTCG CCCTGACCCT TGTGGGCTTG
TTCTTTGCGT TTCCTGCAAT TGCCCTGGGT TTTGCAACCT ACCCGATCCT GACCGTGGTG
GCGCTGACGC TGTTTTTGGC GGCGACCTCG CTCTACTATT ACATCCCGAA ATGGATCTAC
CGCTCCGTCG TTGCGACGCG GGAGGGGGTG TCCACCCGGG ATTTTGCTCC GTCCGAGCGG
GAGTTGCGGC GCATCCGGCC TACGATGCAG ATGGTCTTCC AGGACCCACA GGCCTCGCTC
AACCCGCGCA TGACCGTGGC CGCCATCATC GGCGAGCCGC TGTCTGAGCA TACGACCCTG
TCCAAGGCCG AGCGCAATGA TCGCATCTAT GAGCTTCTGG ACGCCGTCGG CCTCAACCGT
GATTTCGCCA ACCGCTATCC GCACGAATTT TCCGGTGGGC AGCGCCAGCG GATCGGCATC
GCACGGGCGC TTGCCCTCAA TCCCAAGTTC ATTGTCTGTG ACGAGCCGAT TGCCGCATTG
GACGTGTCGA TCCAGGCGCA GGTGGTAAAC CTGCTGGAGG ATTTGCAGGA AAAGCTGGGG
CTGACCTATC TGTTCATCTC CCATGACCTG TCGATGGTGC GCCATATCGC GGACCGTGTG
GCGGTGATGT ATCTGGGCAA AGTGGCCGAG CTGGCCCCGC GCGACGCGCT GTTCAGCGAT
CCGCTGCACC CCTACACCAA GGCGCTTCTG TCCGCCGTGC CCGAGCCCGA TCCGGCGTCC
CACGACGTGG CGGAGCGGGT GATTTTGCAA GGCGATGTCC CGTCGCCGTC CAACCCACCC
AAGGGTTGCA ACTTCTGCAC ACGCTGCCCC GCAGTGATGG ACGTGTGCCG CATTGAAGAT
CCCGAAATGA AAGAGGTGCG CCCGGGCCGT TTCGTCGCCT GCCACCTGCA CAGTTAA
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| Protein sequence | MLDDTSAAAR KLVEVRNLRM YFPIRTGLLR RHTGDVKAVD GVNFDIYEGE TLGLVGESGC
GKSTCGRAVI RLYEPTDGSI QLENKELAWS NIKARDIAQR AERVASVVFF VAFALTLVGL
FFAFPAIALG FATYPILTVV ALTLFLAATS LYYYIPKWIY RSVVATREGV STRDFAPSER
ELRRIRPTMQ MVFQDPQASL NPRMTVAAII GEPLSEHTTL SKAERNDRIY ELLDAVGLNR
DFANRYPHEF SGGQRQRIGI ARALALNPKF IVCDEPIAAL DVSIQAQVVN LLEDLQEKLG
LTYLFISHDL SMVRHIADRV AVMYLGKVAE LAPRDALFSD PLHPYTKALL SAVPEPDPAS
HDVAERVILQ GDVPSPSNPP KGCNFCTRCP AVMDVCRIED PEMKEVRPGR FVACHLHS
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