| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3283 |
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| Symbol | |
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| ID | 3935756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3335317 |
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| End bp | 3336078 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905656 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_511225 |
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| Protein GI | 89055774 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.851404 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCATA AGGATCGTCA TGCCATCGTG ACAGGCGGCG GCACGGGCAT CGGGTTGGGG
ATCGCGCTGG CGCTGGCGGG TGCGGGCGCG CAGGTGACAA TCACCGGGCG TGATGAACGG
CGGCTGGCCT CGGTGGCCGC GATGCACCCC CGCCTGCACG CCCTTGGAAT GGATGTCTCG
TCCGAGGCAT CCGTGCGCGA TGGCGTCGAT CAGGCCGCAG ACGCGCGGGG CCCGGTCTCC
ATTTGCATCG CCAATGCCGG TATCGCCGAA CCCGCCTCGT TCCGGTCCGA GACGCTGGCC
CATTGGCGCG AAACCATGAC CACAAACCTC GATGGCGTGT TTTTGACGTT TCAGGCCGCG
CTCAGCACGT TGGGGCGCGA AGAATGGGGG CGGATGATCG CCATTTCCTC CATCGCGGGC
CTGCGGGGCT TGAAGGGCGC GTCTGCCTAC ACGGCCTCCA AACACGGGGT GATCGGGCTG
GTGCGCGCCT TGTCCGAAGA ACATCTGGGC GCAGAGATCA CCTTTAACGC CATCTGTCCC
GGCTATGTCG ACACGCCCAT CGTGGACCGC AATGCCGAAC AAATCGCCAA ATCCCAGAAG
ATGAGCGCCG AGGACGCCCG CGATCTGCTG GCCCGCGGTA ACCGTCACAA GCGCCTGCTC
GGCACCGATG AGGTGACCGC CACCGCCCTG TGGCTGTGTT CGTCCGCCGC GCGCAGTGTG
AACGGGCAAT CGATCCAGAT CGCGGGCGGT CAGGTCTCGT GA
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| Protein sequence | MEHKDRHAIV TGGGTGIGLG IALALAGAGA QVTITGRDER RLASVAAMHP RLHALGMDVS
SEASVRDGVD QAADARGPVS ICIANAGIAE PASFRSETLA HWRETMTTNL DGVFLTFQAA
LSTLGREEWG RMIAISSIAG LRGLKGASAY TASKHGVIGL VRALSEEHLG AEITFNAICP
GYVDTPIVDR NAEQIAKSQK MSAEDARDLL ARGNRHKRLL GTDEVTATAL WLCSSAARSV
NGQSIQIAGG QVS
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