Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3269 |
Symbol | |
ID | 3935742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3323787 |
End bp | 3324662 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637905642 |
Product | hypothetical protein |
Protein accession | YP_511211 |
Protein GI | 89055760 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.706485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCTTCA CCGTCGCCAC CATCGCGCGG GAGCCCTGGC CCGTTCTCAA CCGCTTCCTC ACCTGGCATC TGGATCAGGG GGCGGAGCGG ATCATCCTCT ACCTCGATGA TCCGGATGAC CCGTCCCTGC CCCGCCTGCG TGGCGAGCCC CGCATTGACG CACGCCCCTG CACGCCCGCG TTCTGGCGCC AGATCGGCCT CAAGCAAGAC GCGCGGTTCA CCCGCCGCCA AAGGGGCGTT CTGTCCCAAG CCTACCACGA GTTGGAGGAT GGCTGGCTTC TGGTTCTGGA TGCCGATGAG ATGATGTGGA TGTCCGGTCG GACGATCCCA GAGGCGCTGG CCACCCTGCC GGATGAAGCG CAAAGCCTGC GCGTGCGCAG CGCCGAACAG GTGCGCCTGT CTGACGGGTC GGAGGCCTTC CGAACCCCCA TCGAGCGGGC CGCCGTGGAC CGTGTCTATG GCGACCTCTC GGGCCTTCTG CGCGCCCGCT TCGGCTTCAC CTACCATCCC GAGGGCAAGA GCTTTCACCG TGCGGGCCAA CGGTTGAACA TGAAACTGCA TTGGGCTCAG GATGCCAACG GCGACCGCAC CCCCGGCCCC GTCTGGGGGC GCGCGGAGCG GGCTTATCTG ATGCATTACG CGGCCCCCGA CTATGCCCGT TGGAGGGCCA AGGTCAACTG GCGCGCAGGT GCCAGCGGCT TTGTCCTGCC GGTGAAAGAG CAGATCACCG AGATCGCCGA AAGCAACGAC CCGGAGGCGG GCTACCAGGA CCTTTACCGG ACGCTGCACG GGCTGACGGA CGCGCAGGCA TTGGCGCTGG AGGCCGAAGG GGGCCTGCTG CGCGACGGGC CGAAGGTCCT GGATCTGGGC GGGTAG
|
Protein sequence | MSFTVATIAR EPWPVLNRFL TWHLDQGAER IILYLDDPDD PSLPRLRGEP RIDARPCTPA FWRQIGLKQD ARFTRRQRGV LSQAYHELED GWLLVLDADE MMWMSGRTIP EALATLPDEA QSLRVRSAEQ VRLSDGSEAF RTPIERAAVD RVYGDLSGLL RARFGFTYHP EGKSFHRAGQ RLNMKLHWAQ DANGDRTPGP VWGRAERAYL MHYAAPDYAR WRAKVNWRAG ASGFVLPVKE QITEIAESND PEAGYQDLYR TLHGLTDAQA LALEAEGGLL RDGPKVLDLG G
|
| |