Gene Jann_3243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3243 
Symbol 
ID3935715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3292082 
End bp3292846 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content65% 
IMG OID637905615 
Producttransglutaminase-like 
Protein accessionYP_511185 
Protein GI89055734 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1305] Transglutaminase-like enzymes, putative cysteine proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.424539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.140408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCTTG ACATCGAAGT GGACCTCGAC GGCACGCTGA TCCCCGGCGA TGCGGCTTTG 
CTGATGATAG AAATGGCCTC GGGCGCAGGG CAGCGGGTTG TGACCTCGGA CCTCGCCGTC
AGTCAAGGTA TGCTGAAACG GCTGGACGGC ACGGCCATGG TCTGGGTCGA TGCGCCGGAG
GGCGCGCTGT CTCTGCGCTA CCGGGCGACC GTGGAGATGT CCGGGCCCGC TGCGGCGCTC
GACCAACTTG CATCCGCACC GTTGCAGGCG CTGCCGGGCG AGGTGCTGCC CTATCTGCGT
CCGTCCCGGT ATTGTCAGGC CGACCTTTTC ACCGACTTTA CTGAGCAGCA ATTCGGCACG
CTGGACGGCG GCTTGAAGAT CCAGGCGATC CGCAACTGGA TCGCGGAGCA TGTGACATAC
ACGTCGGGCA GCTCAGACGG CGCGACAACG GCGGTTGAGA CCTTCGCCGC CCTCAAAGGC
GTCTGTCGGG ATTTCGCGCA TCTCACATGC ACGCTTGCGC GCGCGTCGGG CATTCCGGCC
CGCTACGTGT CTGTCTACGG CGCAGACGTC GCCCCACAGG ATTTTCACGC GATAGCCGAG
GTCTGGCTGG ACGGAGGCTG GCATCCTGTG GACGCCACCG ACATGGGCGC ACCGCACGAG
ATGGCGGTGA TCGCAACGGG TCGCGACGCC GCAGATACGG CCTTCATGGA GACCGCCGGT
TGGGCGTCGC TGACCCGGCA AAACGTGCGG GTGCGTCGGG TCTGA
 
Protein sequence
MQLDIEVDLD GTLIPGDAAL LMIEMASGAG QRVVTSDLAV SQGMLKRLDG TAMVWVDAPE 
GALSLRYRAT VEMSGPAAAL DQLASAPLQA LPGEVLPYLR PSRYCQADLF TDFTEQQFGT
LDGGLKIQAI RNWIAEHVTY TSGSSDGATT AVETFAALKG VCRDFAHLTC TLARASGIPA
RYVSVYGADV APQDFHAIAE VWLDGGWHPV DATDMGAPHE MAVIATGRDA ADTAFMETAG
WASLTRQNVR VRRV