| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3126 |
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| Symbol | |
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| ID | 3935597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3167718 |
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| End bp | 3168743 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905497 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_511068 |
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| Protein GI | 89055617 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.45065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.164882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAACATCC GCGTGGACAA GGGCGCGGCG GGATTGACGC TGCCATTTGA CGTTCTGGAT
GTGCTGATGC CGATGCATCT GATCATCGAC GCCGATGGCC GCATGCGACA TGCCGGACCG
ACGGCGCGCA AAATGTTAGG GGATGTGCCA GTGGCGGGCC TTGCGCTGCT CGATGCGTTC
GAGCTGCGCC ATCCTACCGA TATTGTGGAC TTTTCAGGCC TGAAAGAACA CGCAGGTGAC
CGGCTGTCGC TGGTCCTGAA ATCGGCCGAT CATCTCCCGC TGCGGGCGGT TATCATGCCG
TTGCCGGGCG ACGATGGCAT GATCCTGGAT ATCTCGCTTG GCCTGTCCTT CGCTCGGGCG
GTCAGCGATT TTTCCCTGAC GCTGCACGAC TTTTCGCCCT GCGACCAAAC GATTGAACTT
CTCTATCTGC ATGAGGCCAA CTCCTCAACC GCGCGTCTGT CGCGTCACCT TTCCGAACGC
CTGCAGGCCG CCCATGCCGC AGCCCAACTT CAGGCCCGCA CGGATGTGCT GACAGGCTTG
CACAACAGGC GCGCCATGGA CGATGAGTTG GAATATCTGC TCGTCCAGCG TAGCCACGAT
TTCACGCTGA TGCAGCTAGA CCTCGACCGG TTCAAATACG TCAACGACAC CTACGGCCAC
GCCGCCGGAG ACGCCGTGCT GGTGGAAGTT GGTCGCATCC TGAATGAAGA GGTTCGGCGC
ACAGACTTTC CGGCGCGGGT GGGCGGGGAT GAATTCCTTC TTGTGCTGCG CCCCGCCTTG
AATGCGGATG TGGCAGGTCG CATCGCGCAA CGATTGATCG AACGCATCGA AGTCCCGATT
GTTGTGGACA GCAACGTCTG CCGCATATCG GCCAGTATTG GCATTGCGAC AACGACCCAA
TACCCCAAGC GCCCGAAGGT CGAACAATTG GTCGCGGATG TCGATGGGGC GCTGTACCAG
GCCAAGAATG CAGGCCGGGG GCGCTATGTG ATTGCAAGCG GTGGGGGCAG GGTGCCTGGG
CCCTGA
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| Protein sequence | MNIRVDKGAA GLTLPFDVLD VLMPMHLIID ADGRMRHAGP TARKMLGDVP VAGLALLDAF
ELRHPTDIVD FSGLKEHAGD RLSLVLKSAD HLPLRAVIMP LPGDDGMILD ISLGLSFARA
VSDFSLTLHD FSPCDQTIEL LYLHEANSST ARLSRHLSER LQAAHAAAQL QARTDVLTGL
HNRRAMDDEL EYLLVQRSHD FTLMQLDLDR FKYVNDTYGH AAGDAVLVEV GRILNEEVRR
TDFPARVGGD EFLLVLRPAL NADVAGRIAQ RLIERIEVPI VVDSNVCRIS ASIGIATTTQ
YPKRPKVEQL VADVDGALYQ AKNAGRGRYV IASGGGRVPG P
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