| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3123 |
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| Symbol | |
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| ID | 3935594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3164792 |
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| End bp | 3165841 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905494 |
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| Product | Rieske (2Fe-2S) protein |
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| Protein accession | YP_511065 |
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| Protein GI | 89055614 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
[COG2717] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00337014 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.164048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTCA AATACGTCCC CGTTCAATGG AACCCCAACA AATGGGTCTA TGACGCTGTT
CTTGTGATCA TCATCGTCCT CTACATCACC GCATTCTTGC GCTTCGGTGC CGCGGAAGCC
GATGTCTCCC GACCCATCGA TGGGGCGATC TTGCGGATGC GGGCGTTCGG AACGGCGGCG
TTTTTCATGT TGAGCGCGAC CCTGTGTATC GGTCCGCTCG CCCGGATGGA CACGCGGTTC
TTGCCCTTGC TCTATAACCG TCGCCACTTT GGCGTGCTGA CGGCCGCCGT CGCCTGGACA
CATGCCACCT ACGTCTATGG CTGGTACTTC AGTTTCACGC CGATGGACCG GATGGAAGCG
CTGCTGACCT CAAACACGGC GTTTGACCAG ATCCTGGGCT TTCCGATTGA AGCTCTGGGT
ATGTTTGCGT TGTTCATCTT GCTGATCCTC GCTGCAACCA GCCACGATTT TTGGTTATCG
TTCCTCGGTG CGCCGTTGTG GAAACGCCTG CATTTGTTGA TCTATCTGGC CTATGCCATC
ATCGTGGCCC ACGTGGCCCT TGGCTATCTG CAAGACACCA AGAACCCGAC CTTTGCGATG
CTGTTCATGG TCGCGGCGGT GGGCGTTGCG GGCCTTCACG TGGCCGCGTG GCGGATCGAC
CGGTTGCGCA GCGTCAGCGC GGATTGGGTG CCCGTCTGCG CGCCTGCCGA GATTGCAGAG
GATCGCGCGC GGATCGTTCA GCTTGGCCCC AAAGAGCGCG CCGCGATTTT CCGGTATGAG
GGCAACAAAT TCTCGGCCAT CTCCAACGCG TGCGCGCACC AGAACGGACC GCTGGGGGAG
GGGCGCATCC TTGACGGGTG CGTGACATGC CCCTGGCACG GCTTCCAGTA TCGCATGAAC
GACGGCTGTG CGCCCGCGCC CTTCACCGAA AAAATCCCTA CATATCAACT GCGTCTGGAG
GGTGGCCAGG TGTCGCTCAA CCGCAATGCC AACCCACCGG GAACGCCAGT GGAGCCGCTG
GTGATCGCAG AGCTGGAGGC CGGATCATGA
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| Protein sequence | MSVKYVPVQW NPNKWVYDAV LVIIIVLYIT AFLRFGAAEA DVSRPIDGAI LRMRAFGTAA
FFMLSATLCI GPLARMDTRF LPLLYNRRHF GVLTAAVAWT HATYVYGWYF SFTPMDRMEA
LLTSNTAFDQ ILGFPIEALG MFALFILLIL AATSHDFWLS FLGAPLWKRL HLLIYLAYAI
IVAHVALGYL QDTKNPTFAM LFMVAAVGVA GLHVAAWRID RLRSVSADWV PVCAPAEIAE
DRARIVQLGP KERAAIFRYE GNKFSAISNA CAHQNGPLGE GRILDGCVTC PWHGFQYRMN
DGCAPAPFTE KIPTYQLRLE GGQVSLNRNA NPPGTPVEPL VIAELEAGS
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