Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3095 |
Symbol | |
ID | 3935566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 3131159 |
End bp | 3132100 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637905466 |
Product | AraC family transcriptional regulator |
Protein accession | YP_511037 |
Protein GI | 89055586 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.570459 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGGCGCC ACGCGCATTC TGCCGGAATG ACCGTCCAAC CGAACAATTA CTTCAGCTAT ATCCCTGAAA GTCGTCTGTG CCATGCGCTG GGTTGCACGT TGCAGTCGGC CGGGTTCACG CAAGTTGCCC CTTATGCGGT CTATCCGGCG GGCACCCATC CAAAAGACCA CCTCTTCAGC AAGACCCGGG GACGGGTTTT GCAGGCCTAT CAGATCGTAT TCATCTCCAA GGGGCGTGGC AGGGTGGAGC TGGGAAGTGG CCGCAAGGCG CAAGAGATAC ATGCGGGCCA GGTCTTCGTC CTGTTCCCGA ATGTGTGGCA CCGCTACGCG CCAGAACCTT CGGTGGGCTG GACTGAGCAT TGGGTCGAAT GCAAGGGAAC CGCCTTCGAC ATGTCCTTGA ATGCGGGTTT GCTGGATCCC GGTCGCCCCA TCATTCGACA TCCCAATTTT GAAGCAGTGC ACGACACGTT TGCTGAAATC CACGGGCTTG CCGGGACGGA TGCCGTCGGC AACCAGCCGG TTCTCTCCAT GCTAAGTCTG AAGCTGTTGG CCATTCTTGC CGGGCCCCGC AACGCGAATG AAGACAGCAC CAATCGTCTG GTGAACTCTG CCCGCATGAT ATTGCTTGAA CATTGCACCG GGCAGCGTCC GATGGAGGAT ATCGCGGATG AGTTGAACGT CAGCTATTCC ACCCTGCGCC GCACGTTCCG GGTGCAAACG GGGATGTCGA TGAAGGATTA CCAGATGGCG ATGAGAATTC AGAAGGCCAA GGACCTGCTC GACAATACAG AATTGTCGGT CAAGGGGGTG GCCGGACAGC TTGGGTTCAG CTCTGCATTT CACTTTTCAA GTCAGTTCAG GAAGACCGTC GGGTGCCCGC CATCGGACTG GCGGGCACGC CTCGGGCAGG GAGGGGAGGC CCCCTTTAGC ACACGCGAAT AA
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Protein sequence | MWRHAHSAGM TVQPNNYFSY IPESRLCHAL GCTLQSAGFT QVAPYAVYPA GTHPKDHLFS KTRGRVLQAY QIVFISKGRG RVELGSGRKA QEIHAGQVFV LFPNVWHRYA PEPSVGWTEH WVECKGTAFD MSLNAGLLDP GRPIIRHPNF EAVHDTFAEI HGLAGTDAVG NQPVLSMLSL KLLAILAGPR NANEDSTNRL VNSARMILLE HCTGQRPMED IADELNVSYS TLRRTFRVQT GMSMKDYQMA MRIQKAKDLL DNTELSVKGV AGQLGFSSAF HFSSQFRKTV GCPPSDWRAR LGQGGEAPFS TRE
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