| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3042 |
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| Symbol | |
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| ID | 3935513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3068903 |
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| End bp | 3070576 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905413 |
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| Product | nitrate transport ATP-binding subunits C and D |
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| Protein accession | YP_510984 |
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| Protein GI | 89055533 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
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| TIGRFAM ID | [TIGR01184] nitrate transport ATP-binding subunits C and D |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.499138 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.908503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATGTC TTGAGCTGAA AAATGTGTCC AAAAGCTATG GCGAAACGCC CGTGCTGAGC
GACATTAACC TTGAGATCAA GGAGGGGGAA TTTCTGGTCC TTCTGGGATT TTCGGGCACC
GGAAAGACGA CGCTGATCAA CCTGATGGCG GGCCTGGAGG CACCGTCGAA GGGAGAGGTG
ACGTTCAAGG GCGCCCCGGT GGTTGAACCG GGCCCGGAGC GCGGCGTGAT TTTCCAGAAC
TATTCGTTGA TGCCGTGGTT AACGGTGGCG GGGAATGTGG GGCTGGCCGT GGACACGATG
TTTGGCGATC TGCCCAGGGC AGAGCGCGCC AAGAGGGTGG ACCGCTACGT GGATATGGTG
GGGCTGACGC CTGCTGCCAC GCGCCGCCCG GCGGAATTGT CCGGCGGGAT GCGGCAGAGG
GTGAACGTGG CACGGGCCTT AGCGATGGAC CCCGAAATGC TGCTGCTGGA TGAGCCGTTG
AGCGCGCTGG ATGCGCTGAC AAGGGCGAAT TTGGCGGAAG AGATTGAGAG GATCTGGGAG
GCCAGCAAAA AGACCTGCGT GCTGATCACA AACGATGTGG ATGAGGCGAT CTTGCTGGCG
GATCGGATCA TTCCGATGAA CCCCGACGGC ACTTTGACGG ACGCGTTCGA GGTGGGCATT
GCACGCCCCA GGGACCGGGT CGCGATGAAC ACAGACGCCG AGTTCATTCG CCTGCGCGCT
GAGGTCACGA AGTACCTGAT GGATGTGGGG ATCGAGGCGA AGGTGGAAGG CACGCGCGTG
CTGCCCGAGG TGACGCCGAT CCACGGCGTG CCTTTGGCGG TAGCGAATGC CGCGCAAACG
GCGCTGGAAG AGAGGTATCT GGAATTCTCC AAGGTCCATA AGGTTTACCC GACGCCGAAG
GGCCCGCTGA CAGTGGTCGA AGATTTCGAC CTGAAGCTGC GCCGGGGGGA ATTTATCTCG
CTGATCGGGC ATTCGGGCTG CGGTAAATCC ACGGCGCTGA CGATGGTGGC GGGGCTCAAC
CCGATCTCCA AGGGCGCGAT CAAGCTGGAC GGACGCGCTG TTGAGGGCGC GGATCCGGAG
CGGGCGGTGG TGTTTCAGTC CCCGTCGTTA TTCCCATGGC TATCTGCCCG CGAAAACTGC
GCGATTGGGG TGGATAAGGT CTACCCCAAA GCGTCGCGGG CGGAGCGGCA GGATGTGGTG
GATTACTACC TTGAACGGGT GGGTCTTGCC GACGCGATGG ACAAGCGTGC GGCCGACCTG
TCCAACGGCA TGAAACAGCG CGTGGGCATT GCGCGGGCCT TTGCCCTTTC CCCCAAATTG
CTGCTGCTCG ATGAGCCGTT TGGCATGCTC GACAGCCTCA CCCGGTGGGA GCTGCAAGAG
GTCCTGATGG AGGTCTGGTC GCGCACCAAA GTCACCGCGA TTTGCGTCAC CCATGATGTG
GATGAGGCCA TTCTTTTGGC CGACCGTGTT GTCATGATGA CCAACGGGCC GCAGGCGACC
ATCGGCAAGA TCACGGATGT GAACCTGCCC CGCCCGCGCA CCCGCAAGGC GCTGTTAGAG
CACCCGGATT ACTACAGCTA CCGCCAGGAT GTCCTCGATT TCCTTGAGGA ATACGAGCAT
GGCGCGAAAC CCAGACCAAA AGCCGCAGCG CCCAAAGCTG TCGCGGCGGA GTGA
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| Protein sequence | MACLELKNVS KSYGETPVLS DINLEIKEGE FLVLLGFSGT GKTTLINLMA GLEAPSKGEV
TFKGAPVVEP GPERGVIFQN YSLMPWLTVA GNVGLAVDTM FGDLPRAERA KRVDRYVDMV
GLTPAATRRP AELSGGMRQR VNVARALAMD PEMLLLDEPL SALDALTRAN LAEEIERIWE
ASKKTCVLIT NDVDEAILLA DRIIPMNPDG TLTDAFEVGI ARPRDRVAMN TDAEFIRLRA
EVTKYLMDVG IEAKVEGTRV LPEVTPIHGV PLAVANAAQT ALEERYLEFS KVHKVYPTPK
GPLTVVEDFD LKLRRGEFIS LIGHSGCGKS TALTMVAGLN PISKGAIKLD GRAVEGADPE
RAVVFQSPSL FPWLSARENC AIGVDKVYPK ASRAERQDVV DYYLERVGLA DAMDKRAADL
SNGMKQRVGI ARAFALSPKL LLLDEPFGML DSLTRWELQE VLMEVWSRTK VTAICVTHDV
DEAILLADRV VMMTNGPQAT IGKITDVNLP RPRTRKALLE HPDYYSYRQD VLDFLEEYEH
GAKPRPKAAA PKAVAAE
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