| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3036 |
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| Symbol | |
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| ID | 3935507 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3061370 |
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| End bp | 3062806 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905407 |
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| Product | hypothetical protein |
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| Protein accession | YP_510978 |
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| Protein GI | 89055527 |
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| COG category | [S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG0631] Serine/threonine protein phosphatase
[COG3913] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03373] type VI secretion-associated protein, BMA_A0400 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.582352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGACC GGGGGGGCAC GCATATTCCG CATTGGCGCG GCTACTACGG CAAAGTGCCG
GTGGCCGGCG ATTTCGTCAG CCATGGCCTG CCCCGGTCGG TGGAAAACGT GCTGGACGAC
TGGCTGCGCC GTGCCATTCG CGACAGTCAG AAGCGGCTGG GGCGCGACTG GCTCGATGCG
TTTCTGGTGA CGCCCGTCTG GCGCTTTGCG CTGGCGGCGG GCCTTCTGGG GCCACAGCCC
GTAGCGGGCG TGATGATGCC GTCGGTGGAC CGTGTGGGCC GCTACTTTCC GCTGATGATC
GCCGCCTCCC GACCCGATGC CACCGGCGAT ATTCTGGCGC TGTCCGCCGA TGGGCTGTTT
TATGACGCCG CCGAGGCGCT GGTTCTGTCG CGGTTGGACG CCACCGTACC CTTTCAGGCC
CTGGTCGATG GGTTGTCCGC CCTGCCCTTC GCACATCTGC CCCAAATTGA CCCGGACCCC
GAGGACGAAG CCGCCGCCCT GTGGTGGACG GGCCGTGACG CGGCGCAAAC CCATGCCACC
ATCGGATTAC CTCAACATAC TGATTTTTCT GATATCTTTC TATGCAAGGC ACCGAAGAGC
CTGGCCGGGC ACGCCCCGGC AACACCCGCC CCGCTACGGC AACCAGAGGC GGCGGAGATG
CAACCAGACC ACCGGCTGAC ACGACGCCCC ATGCTGGTGC GCGAGGCCCC CGCCCCCGAC
ACGTCCCCCC TCCCCCAATC TCCGGCAGAG CCCACCACCG CCACCCTGCT TGGCGTTGAT
CACGCCTTCG CCTCACTCAA AGGCACCCGC TCTGCCGCGC TGACAGATGC CGTGTCGGTG
AGTGGCGATG GTCAGGCATT CTCGCTCTTG TCCGGGATCG GGCAGGATGC CGCCCTGCCC
GCACAGGTCT CGGGGTTGGT GCCTGTGCTG GCCGAGATCG CCGCGCCGTT TTCAATGAAT
GACCTTATCG CCGAGGCGAA GGGCAAACTG GGGCGCGCCA ATACCTTCCT GACCGCCCGC
AGCGCGACCT CAGGGCAGAC GACGGCAGTG GCCACCATAA GTGTTCTGGT GCAAGCGCGG
CGATATGCCG TGCTTTGGGC CGGGCATTGC ACCGCCTGGC TCCAGCGTGA CGGAACATTG
CACCCGCTCA ACCGGCCCCA TGTGGATGCC CGCCTGCGCG GCACCGTCAC CCGCGCTTTG
GGTGTGACGC GGACTATAAC GTTTGATACC GCCATCGGGC AGGCTCAGGC TGGGGACAGA
TTCCTGTTGC TGTCTCCCGG TGTGACCCAC GCCCTCCCCC CCGATGAAAT TGCCCGCACT
TTGGCCACTG CTGACACGCC ACAAATGGCT GTGACACAAG TGACCCAGAA TGCGCTGATC
GAAGGCACTC CTCTTGACGC CACCGCGCTC GCCATCTTCC TATCACCGCG CTCCTGA
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| Protein sequence | MKDRGGTHIP HWRGYYGKVP VAGDFVSHGL PRSVENVLDD WLRRAIRDSQ KRLGRDWLDA
FLVTPVWRFA LAAGLLGPQP VAGVMMPSVD RVGRYFPLMI AASRPDATGD ILALSADGLF
YDAAEALVLS RLDATVPFQA LVDGLSALPF AHLPQIDPDP EDEAAALWWT GRDAAQTHAT
IGLPQHTDFS DIFLCKAPKS LAGHAPATPA PLRQPEAAEM QPDHRLTRRP MLVREAPAPD
TSPLPQSPAE PTTATLLGVD HAFASLKGTR SAALTDAVSV SGDGQAFSLL SGIGQDAALP
AQVSGLVPVL AEIAAPFSMN DLIAEAKGKL GRANTFLTAR SATSGQTTAV ATISVLVQAR
RYAVLWAGHC TAWLQRDGTL HPLNRPHVDA RLRGTVTRAL GVTRTITFDT AIGQAQAGDR
FLLLSPGVTH ALPPDEIART LATADTPQMA VTQVTQNALI EGTPLDATAL AIFLSPRS
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