Gene Jann_2996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2996 
Symbol 
ID3935466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand- 
Start bp3016369 
End bp3016950 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content63% 
IMG OID637905366 
ProductTetR family transcriptional regulator 
Protein accessionYP_510938 
Protein GI89055487 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.542374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.411304 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGCA CCCAAGGCTC TCATGCCGGT ACGACCGGCC CGAAGGTCCG CGCGACGGCG 
TTGCGGCTGT TTGCTCAGCA TGGCTATGCG GCGGTCTCCA TGCGCCAGAT CGCGCGGGAG 
GTGGGCGTTC AGGCCGGGGC GCTGTATCTA TACACCCCTG ACAAACAAGC ACTTTTGTTT 
GAGCTGATGC GAACCCACAT GGAGGAGCTT CTGGGCGATT GGTCGCCTCC CGGCGGCGGC 
CCTCTGGCAG AATTGGAAGA TTTCGCCCGT CACCATATCC GCTTTCATCT CGACCGCCCG 
GACCTTGTCT TCATCGCCTA TATGGAGCTG CGCAATCTGA CGCCCGAGAA TTTCGCGGTC 
ATCGAAGAGC TGCGCGGCGC GTATGAGGCG CGGTTGGAAA GTGTGTTGCG CAGCGGCGTG 
GCGGCAGGCG TGTTTGATGT GGCGGATTTG CGGCTGGCGA CCATGGGTCT GATCTCCATG 
TTGACCGGCG TCACGACATG GTTCCGCGAC GACGGGCGCC TGACCCGCAC GGATGTGGAG 
GCGATTTACT GGGACATGGT GCGCCGCGCA GTGGCGGCTT AG
 
Protein sequence
MARTQGSHAG TTGPKVRATA LRLFAQHGYA AVSMRQIARE VGVQAGALYL YTPDKQALLF 
ELMRTHMEEL LGDWSPPGGG PLAELEDFAR HHIRFHLDRP DLVFIAYMEL RNLTPENFAV 
IEELRGAYEA RLESVLRSGV AAGVFDVADL RLATMGLISM LTGVTTWFRD DGRLTRTDVE 
AIYWDMVRRA VAA