| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2977 |
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| Symbol | |
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| ID | 3935447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2994814 |
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| End bp | 2997015 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905347 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_510919 |
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| Protein GI | 89055468 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.271442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.337869 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT TCACCATGCA GACCGACGCC GATGGCGTTG CTGTCATCAC CTGGGACGTG
CCCGGAAAAT CCATGAATGT GCTGAACCGG GATGCCTTTG ATGTCGTCGA AGAGTTGGTC
GATGCAGCGC TGGCCGATGA GACGGTCAAG GGCATCGTGA TCACCTCCGG CAAGTCGTCC
TTTGCGGGGG GTATGGACCT CAATGTGCTG GCCTCGATCC GCGCGGAAAG CGGCGACAAC
CCGGCGGAGG GCCTGTTCAA CTTCACGATG AACGGCCACC GCATCCTGCG CAAGATTGAG
CGCGCGGGGA TGGAGCCCAA GACCAACAAG GGTGGCAAGC CCATCGCCTG CGCCATTCCG
GGCACCTGTG CGGGCATCGG CACGGAGATC GCGCTCGCCT GCCACCGCCG TTTCATGGCG
GACAATCCCA AGGCGAAGAT GGGCCTGCCG GAGATCCTCG TGGGCCTTTT CCCCGGCGCG
GGCGGCACCA CCCGCTATTC GCGCATGGTC GGAGCCATGG CCGCAGCGCC TGTGCTGCTG
GAGGGCCGGA TGCTGGACCC GAAGAAGGCC AAGTCCGCTC AATTGGTGGA TGAGGTCGTT
CCGGCGGACG AGCTGCTGTC TGCTGCCAAG GACTGGGTCT TGAACGCGGC CCCCGCAGAC
ATCGTGAAGC CGTGGGACGC CAAAGGCTAC AAGATGCCCG GCGGCGCGCC CTACCATCCT
GCGGGGTTCA TGACCTTTGT GGGCGCGAAC GCAATGATCC ACGGCAAGAC CAAAGGCGTC
TATCCGGCCG CCAAGGCGCT TTTGTCGTCG ATCTATGAGG GCGCGTTGGT GGATTTCGAC
ACGGCGCTCA AGATCGAGGC GCGGTATTTC ACTCAAATCC TGATGAACCC CTCGTCATCC
GCGATGATCC GGTCGCTGTT CATCAACAAG CAAGCGTTGG AGAAGGGCGC GAACCGTCCT
TCCGTTCCCG ATCAGACGGT CAAGAAGGTC GGCATCATCG GCGCAGGCAT GATGGGCGCG
GGCATTGCCT ATGTCTCGGC CTTGGCTGGC ATTGAAGTCG TGCTGATCGA CGCCGCGCAA
GACTCTGCGG ATCGCGGCAA AGCCTACTCG GAAGGGCTTC TCGACAAAGG CATGAAACGC
GGCAAGGTGA CGGAGGAGAA GAAGGCCAAG GTCCTGGGCC AGATCACCGC CACCACGGAT
TATGATGCGC TGAATGGCTG CGACCTGATT GTGGAGGCCG TGTTTGAAGA CCCCAAGGTC
AAGGCAGAGG TGACCGCAAA GGCCGAAGCC GCGATGAATG CAGACGGGAT CTTTGCCACC
AACACCTCCA CCCTGCCCAT TACGATGCTG GCCAAGGCAT CGTCGCGCGC GGAGCAATTC
ATCGGCATCC ACTTCTTCTC TCCGGTCGAC AAAATGGCGC TGGTGGAGAT CATCAAGGGC
AAACAAACCG GGGATGTGGC CGTGGCCAAA GCGCTCGATT TCGTGCGCCA GATCCGCAAG
ACGCCCATCG TCGTGAACGA CGAGCGGTTC TTCTACGCCA ACCGCTGCAT CCTGCCCTAC
GTCAATGAGG GCGTGCGGAT GTTGCAGGAA GGCGTGGCCC CTGCCCTGAT CGAGAACGCC
GCCAAACTGG TCGGCATGCC GCTGGGTCCG CTGCAATTGA CCGACGAGAC ATCCATTGAC
CTCGGCGCCA AAATCGCCCG CGCCACCAAG GCCGCCGACC CGGACTATGA CGACACCACC
GATGAGCTGA TCTTCTGGAT GGAAGAGGAA GGGCGCCTGG GTCGCAAGGC CAATGCGGGC
TTCTACAGCT ATGATGAGAA GGGCAAGCGG CAGGGCCTCT GGGACGGTCT GGGCGCGCGC
TACGCTCAGG CCGATGATCA GCCCGAGTTG ACCGACGTGC AGCACCGCCT CCTGTTCGCG
CAGGTGTTGG AGGCCGTCCG CGCACTGGAG GCTGGCGTTC TGATGGACAT CCGCGAAGGC
GACGTCGGTG CGATCCTGGG ATGGGGCTTT GCGCCCTGGT CCGGTGGTCC GTTCTCCTGG
CTCGACATCC TGGGCACGCC CTATGCGGCG GAACGCTGCG ACCAACTGGA GGCCGAGTTT
GGCCCCCGCT TCGCCTGCCC GCCCCTGCTG CGTGAGATGG CCGACAAGGG GCAAAGCTTC
TACGGCCGCT TCGGCGAGGG TGTGGACAGC AAAGCAGCCT GA
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| Protein sequence | MTDFTMQTDA DGVAVITWDV PGKSMNVLNR DAFDVVEELV DAALADETVK GIVITSGKSS
FAGGMDLNVL ASIRAESGDN PAEGLFNFTM NGHRILRKIE RAGMEPKTNK GGKPIACAIP
GTCAGIGTEI ALACHRRFMA DNPKAKMGLP EILVGLFPGA GGTTRYSRMV GAMAAAPVLL
EGRMLDPKKA KSAQLVDEVV PADELLSAAK DWVLNAAPAD IVKPWDAKGY KMPGGAPYHP
AGFMTFVGAN AMIHGKTKGV YPAAKALLSS IYEGALVDFD TALKIEARYF TQILMNPSSS
AMIRSLFINK QALEKGANRP SVPDQTVKKV GIIGAGMMGA GIAYVSALAG IEVVLIDAAQ
DSADRGKAYS EGLLDKGMKR GKVTEEKKAK VLGQITATTD YDALNGCDLI VEAVFEDPKV
KAEVTAKAEA AMNADGIFAT NTSTLPITML AKASSRAEQF IGIHFFSPVD KMALVEIIKG
KQTGDVAVAK ALDFVRQIRK TPIVVNDERF FYANRCILPY VNEGVRMLQE GVAPALIENA
AKLVGMPLGP LQLTDETSID LGAKIARATK AADPDYDDTT DELIFWMEEE GRLGRKANAG
FYSYDEKGKR QGLWDGLGAR YAQADDQPEL TDVQHRLLFA QVLEAVRALE AGVLMDIREG
DVGAILGWGF APWSGGPFSW LDILGTPYAA ERCDQLEAEF GPRFACPPLL REMADKGQSF
YGRFGEGVDS KAA
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