Gene Jann_2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2966 
Symbol 
ID3935436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2985936 
End bp2986439 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content65% 
IMG OID637905336 
Productthioesterase superfamily protein 
Protein accessionYP_510908 
Protein GI89055457 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.697555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0270768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGCA CGCCGCCCGA ACCCGTCGAG GTCATCAAAA GCCGCCGCGA CCGCGCCCTG 
GCCGCTCTTG TCGCGGGCGT GCCCTACATC GCGACCATGG GCATTGGTTT TGACCGCCGC
GGCGATGAGC TGACGGCGGT TCTGAATTAT CAGGACAAGC TGATCGGCAA CCCCATGCTA
CCCGCGATCC ACGGCGGGGC CACGGCATCT TTTCTGGAGG TCGCCGCGAT CATGGAGCTG
GGCTTCAACC TGCTGTGGGA TGAGATTGAG ACGGGGCGTC TGGACGCTGA CACGCTGACG
CCTGAGACGC TGCCACGGAT GCCCAAGACG ATTGATTTCA CCGTCGATTA CCTGCGCTCC
GGCCTGCCGC GTGACGCCTA TGCGCGGGCA AGGGTGAACC GGTCCGGACG GCGCTATGCC
AGCGTCCATG TGGAGGCTTG GCAGGACAAC CGCCAAAGGT TGTTCGCGCA GGCCACCGGG
CATTTCCTGA TGCCCGCGCG GTAG
 
Protein sequence
MMRTPPEPVE VIKSRRDRAL AALVAGVPYI ATMGIGFDRR GDELTAVLNY QDKLIGNPML 
PAIHGGATAS FLEVAAIMEL GFNLLWDEIE TGRLDADTLT PETLPRMPKT IDFTVDYLRS
GLPRDAYARA RVNRSGRRYA SVHVEAWQDN RQRLFAQATG HFLMPAR