| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2940 |
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| Symbol | |
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| ID | 3935410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2962798 |
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| End bp | 2963703 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905310 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510882 |
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| Protein GI | 89055431 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0170064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.0000113665 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTGACCC TGCGCCAATT GCAATCGGTT GTGGCCGTGG TGGAGGAGCG GTCCTTCACC
CGTGCCGCAG ACCGCGAGAA TGCGACCCAA TCGGGGATCT CACAGCATGT GAAAGCGGTG
GAGGCGAGCC TTGGCGTGGC GCTGTTTGAA CGCACCAGCG ACGGAGTCAA ACCGACGCCT
GCGGGCCAGC GATACTACCA CCATTGCATC GACGTGCTGC GGACCCTGGA CGTGGCGAAG
GATGAGGCGC GCGAGACCGG TATCGAGGTC ACGGGCAAGA TCCGCGCGGG GCTGATCCCG
GCCTTCACCC GCGCTGCTCT GGCCCCCGCA TTGGAGCGGT TCACAGCGCA ATACCCGGGC
GTGGAGGTGG AGGTGATCGA AGGCTACAGC GGCGCGCTGA CGGACCGGGT GCGCGCGCAG
GCGCTGGACT TCGCGCTGGT GCCGGGGTTT GCGGGGGAGA CCGGGTTGAA GCTGACGCAT
CTCAACCGGT CGCGCGAAAT GCTGGTATCG GGCGCGCGGC GTGGTTTGAC GCATCTGGAG
CCGTTGCGCC TCGCCGATCA GCCGCCCCTG AAACTGATCG TGCCGTCGCA GTCAAACGTG
CGGCGCGCGA AGATCATGGA ATACGCGGAA ACCCACGGCG TGCGCATTGA CCGGGTGCTG
GATATGGATG CGATGCTTGG GACGCTGGAA CTGGTGGCGG CCAGTGACTG GGTCACGATC
CTGCCCTGGG TGATTTGCAG CGCCGACGCG GCGGGCGACG TTAGGCGGGT GTCGCCGCTG
ATTCATCCGG AACTGCATTC GGATTTCGTG GTGATCGAGC CCGCGCGGCG TCCCCTTCCG
CCGGAGGGGC ACCTGTTTCT GGATGAGATC CGCGCGGAAC TGGAGCGGCT GGAGGAGCCC
GCCTAG
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| Protein sequence | MVTLRQLQSV VAVVEERSFT RAADRENATQ SGISQHVKAV EASLGVALFE RTSDGVKPTP
AGQRYYHHCI DVLRTLDVAK DEARETGIEV TGKIRAGLIP AFTRAALAPA LERFTAQYPG
VEVEVIEGYS GALTDRVRAQ ALDFALVPGF AGETGLKLTH LNRSREMLVS GARRGLTHLE
PLRLADQPPL KLIVPSQSNV RRAKIMEYAE THGVRIDRVL DMDAMLGTLE LVAASDWVTI
LPWVICSADA AGDVRRVSPL IHPELHSDFV VIEPARRPLP PEGHLFLDEI RAELERLEEP
A
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