Gene Jann_2934 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2934 
Symbol 
ID3935403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2957521 
End bp2957940 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content62% 
IMG OID637905304 
Producthypothetical protein 
Protein accessionYP_510876 
Protein GI89055425 
COG category[S] Function unknown 
COG ID[COG5469] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0112187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00298069 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCAAAG AAAACCCACC TGTTTTGGGA GAGCGGGCGC CCACGGAAGT GCTTGTCTGC 
GTCAAATGCC TGCGCGGCCT TGAGGCGCCC GAAGACGGCG ACCGTCCGGG CCGGAAACTC
TACAATGCTC TCATCCAGCG CGAGATGCCC GAAGGCGTCA CGATTCGTCC GATGGAATGC
CTGCAGAACT GCGACAGCGG CTGTTCCGTG GCGATCCGGG GCGGCGATGC CCGCTGGACC
TATGTTTACG GAAATTTCCT GGAGGGGTCG CATCCGGACA TGCTGGCCGA AGGGATTGCC
CTTTATCACG ACACGCAAGA CGGCCTGATC CCGTGGCGTG CGCGCCCCGA ACATTTCAAA
CGCAACTGCA TCGCGCGCAT CCCGCCGATC AATGGAAAGG AGGCCTGTAC CCATGGCTGA
 
Protein sequence
MAKENPPVLG ERAPTEVLVC VKCLRGLEAP EDGDRPGRKL YNALIQREMP EGVTIRPMEC 
LQNCDSGCSV AIRGGDARWT YVYGNFLEGS HPDMLAEGIA LYHDTQDGLI PWRARPEHFK
RNCIARIPPI NGKEACTHG