Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2934 |
Symbol | |
ID | 3935403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2957521 |
End bp | 2957940 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637905304 |
Product | hypothetical protein |
Protein accession | YP_510876 |
Protein GI | 89055425 |
COG category | [S] Function unknown |
COG ID | [COG5469] Predicted metal-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0112187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00298069 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCAAAG AAAACCCACC TGTTTTGGGA GAGCGGGCGC CCACGGAAGT GCTTGTCTGC GTCAAATGCC TGCGCGGCCT TGAGGCGCCC GAAGACGGCG ACCGTCCGGG CCGGAAACTC TACAATGCTC TCATCCAGCG CGAGATGCCC GAAGGCGTCA CGATTCGTCC GATGGAATGC CTGCAGAACT GCGACAGCGG CTGTTCCGTG GCGATCCGGG GCGGCGATGC CCGCTGGACC TATGTTTACG GAAATTTCCT GGAGGGGTCG CATCCGGACA TGCTGGCCGA AGGGATTGCC CTTTATCACG ACACGCAAGA CGGCCTGATC CCGTGGCGTG CGCGCCCCGA ACATTTCAAA CGCAACTGCA TCGCGCGCAT CCCGCCGATC AATGGAAAGG AGGCCTGTAC CCATGGCTGA
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Protein sequence | MAKENPPVLG ERAPTEVLVC VKCLRGLEAP EDGDRPGRKL YNALIQREMP EGVTIRPMEC LQNCDSGCSV AIRGGDARWT YVYGNFLEGS HPDMLAEGIA LYHDTQDGLI PWRARPEHFK RNCIARIPPI NGKEACTHG
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