Gene Jann_2929 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2929 
SymbolcobH 
ID3935398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand- 
Start bp2951110 
End bp2951739 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID637905299 
Productprecorrin-8X methylmutase 
Protein accessionYP_510871 
Protein GI89055420 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2082] Precorrin isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.451647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.00280569 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCTATG AATACGAGAA AAACGGCGCG GCCATTTATG ATGAGAGCTT CGCCACCATC 
CGGGCCGAGG CCAATCTGGC ACGGTTCAGC GCCGAGGATG AACAGGTCGT GGTGCGCATG 
ATTCACGCGG CAGGGCTTGT GGGGCTGGAG GATGTCGTGA AAATCGCCCC CGGCATGGTG 
CAAGCCGCGC GGACTGCGCT GGACAACGGC GCGCCCGTCT TTTGTGATGC CTATATGGTC 
AGCGAGGGGG TGACCCGCAA ACGCCTGCCA GCAGAGAATG ACGTGATTTG TACGCTCCGC 
GACGCCCGTG TTCCTGCGAT GGCGGCGGAT TTGGCCACAA CCCGGTCGGC CGCGGCGCTG 
GAGCTGTGGC GCGACCGTCT GGACGGCGCC TTGGTGGCCA TCGGGAACGC GCCGACCGCT 
CTCTTCCATC TTCTGGAAAT GCTGGAAGAT CCAAACTGCC CACGCCCCGC TGCCATCATC 
GGCTGCCCCG TGGGCTTTGT GGGTGCGCGC GAAAGCAAGG ATGCGCTGTC GGCGGCGGCC 
CCCGTCCCGT CGTTGATCGT GGAGGGACGA TTGGGAGGCT CCGCTATCAC GGTCGCCGCG 
ATCAATGCCA TTGCGAGCCG TGCGGAATGA
 
Protein sequence
MPYEYEKNGA AIYDESFATI RAEANLARFS AEDEQVVVRM IHAAGLVGLE DVVKIAPGMV 
QAARTALDNG APVFCDAYMV SEGVTRKRLP AENDVICTLR DARVPAMAAD LATTRSAAAL 
ELWRDRLDGA LVAIGNAPTA LFHLLEMLED PNCPRPAAII GCPVGFVGAR ESKDALSAAA 
PVPSLIVEGR LGGSAITVAA INAIASRAE