Gene Jann_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2889 
Symbol 
ID3935357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2909075 
End bp2910196 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content65% 
IMG OID637905258 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_510831 
Protein GI89055380 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000172243 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATACA CAGCGATAGA CTTGTTTTGC GGGGCTGGCG GCCTGTCCGC CGGGCTTGAG 
ATGGCAGGCT TCACCGTGCT GGCGGGCAAT GACCTCTTTG ACGCGGCGGG CCGGACGTTT
GAGGCCACGC ACCCGAGGGC GAAGTTTATC TCCGGCCCGA TTGAGGAGCT TTCTGTTGAG
CGCCTGATGG AAGTCACGGG CCTGCGCAAG GGCGAGTTGT CGGTGCTGGT CGGTGGCCCG
CCCTGTCAGG CCTATTCGGT CTACAACCAC CAGCGCGGGA TGCACGACGC CCGGGCTTCC
CTGTTCCGGG AATACCTGCG GATAGTCGAT GGCCTGCGGC CCGAATGGAT TGTGATGGAG
AACGTCACCG GCATCTACTC CATCGCCAAC GGGGAAGCCG TCCGGGCGAT CAAGGCGGAG
TTTGCGGCCC TCGGTTATGC CGTGGAGGAC GCGGTGCTGC GCGCAGAGGA CTACGGGGTG
CCACAGGAAC GGCGGCGCGT CGTGTTCATT GGCAACCGCG TAGGTGCGCC CATCTCGCAC
CCGGAGCCCA CGCACGGGCC GGGGCGCGCT AACCCGTTCA CCAAGATCAG GGACGCAATA
GGGGACCTGC CCCCGCTCGA CAATGGCGAG AACCCGGGCC GCGTTGCCTA CGCTGATGCC
AGACCGAGCA AATACCAGCG CCAGATGCGC GGGAACGCGA TCACCGTGGG CAACCACGCA
GCCCCGAGGC TCGGCAAGGT CAACATGGAC CGGCTGCCCT ACATCCCACC CGGCGGGAGC
TGGCGCGACA TTCCGCATGA CCTGCTGCCC GAGGGGATGA AGCGCGCCAA GCGGTCGGAC
CATACCAAGC GATACGGGCG CATGACATGG GACGGGCTTT CTTGCACAGT CCTGACCAAA
TGCGACATCC ACTGGGGGGC CTACATCCAC CCGGAACAGG ACCGCGCCAT TTCGGTGCGC
GAGGCGGCGC GGCTCCAAGC CTTCCCCGAC TGGTTCGAGT TTGCTGGATC GAAGACAGAA
CAGTATGTGC AGGTCGGCAA CGCGGTCCCG CCCCTCTTGG GCAAGGCTGT TGGCGACCAC
CTGATGCAGC TCATGGCTGC GCAGGGCGAA GTCGCAGCCT GA
 
Protein sequence
MTYTAIDLFC GAGGLSAGLE MAGFTVLAGN DLFDAAGRTF EATHPRAKFI SGPIEELSVE 
RLMEVTGLRK GELSVLVGGP PCQAYSVYNH QRGMHDARAS LFREYLRIVD GLRPEWIVME
NVTGIYSIAN GEAVRAIKAE FAALGYAVED AVLRAEDYGV PQERRRVVFI GNRVGAPISH
PEPTHGPGRA NPFTKIRDAI GDLPPLDNGE NPGRVAYADA RPSKYQRQMR GNAITVGNHA
APRLGKVNMD RLPYIPPGGS WRDIPHDLLP EGMKRAKRSD HTKRYGRMTW DGLSCTVLTK
CDIHWGAYIH PEQDRAISVR EAARLQAFPD WFEFAGSKTE QYVQVGNAVP PLLGKAVGDH
LMQLMAAQGE VAA