| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2807 |
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| Symbol | clpX |
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| ID | 3935273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2821260 |
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| End bp | 2822525 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637905174 |
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| Product | ATP-dependent protease ATP-binding subunit ClpX |
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| Protein accession | YP_510749 |
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| Protein GI | 89055298 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
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| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0203528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAGTA ACTCCGGCAA CGATTCCAAG AATACGCTCT ATTGCTCATT CTGCGGCAAG
AGCCAGCATG AGGTGCGCAA GCTGATCGCG GGCCCCACGG TGTTTATCTG CGACGAATGC
GTCGAACTCT GCATGGATAT CATTCGCGAG GAAACCAAAA GCGCAGGTCT GAAAAGCGAT
GATGGCGTGC CGACCCCGCA AGAAATCTGC GGTGTGTTGG ATGATTACGT GATCGGCCAA
GCCCACGCCA AGCGCGTGTT GTCGGTGGCT GTGCATAACC ACTATAAACG CTTGAATCAT
TCGGATAAAT CCGACATCGA ACTGGCCAAA TCCAACATCA TGCTGATCGG TCCCACCGGG
TGCGGCAAGA CGCTGCTGGC TCAGACCTTA GCGCGCATCC TTGATGTGCC GTTCACGATG
GCTGATGCGA CGACGCTGAC GGAAGCGGGC TATGTCGGAG AGGATGTGGA AAACATTATC
CTCAAGCTCC TGCAGGCGTC CGAGTATAAT GTGGAACGGG CCCAACGCGG CATTGTCTAC
ATCGATGAAG TCGATAAAAT CACACGCAAA TCTGACAATC CGTCCATCAC CCGCGATGTC
TCGGGCGAGG GGGTTCAGCA GGCGTTGCTG AAGATTATGG AGGGCACCGT GGCCTCCGTG
CCGCCCCAGG GGGGGCGCAA GCATCCGCAG CAGGAATTCC TGCAAGTGGA CACGACGAAT
ATCCTGTTCA TTTGTGGCGG CGCGTTTGCG GGTCTTGATA AGATCATCGC GCAGCGCGGC
AAAGGCTCTG CCATGGGGTT CGGGGCCGAT GTCCGTGACC CAGATTCCAA GTCCGTGGGG
GAATACTTCA AGGATCTGGA GCCTGAGGAT TTGCTGAAAT TCGGCCTGAT CCCTGAATTT
GTTGGCCGCC TTCCGGTCAT CGCGACGCTG GAAGATCTGG ATGAAGACGC TCTGGTCACG
ATCCTGACGG GTCCGAAGAA CGCGTTGGTC AAACAATACC AGCGCTTGTT TGAGCTTGAA
GACGTCAAAC TGACATTTAC CGACGATGCC ATGAGCGCGA TCGCCAAGCG TGCGATTTTG
CGCAAGACCG GCGCGCGGGG ATTGCGCTCG ATCATGGAAG ACATCCTGCT GGACACCATG
TTCGACATGC CCGGAGCGGA GGGCGTTGAA GAGGTTGTGG TCAACGAAGA GGCGGTGAAT
TCAGACACAC AGCCGCTGAT GATTTACGCC GAGCGTAAGG CAGATGAGCC GGCGTCGGCC
AGCTGA
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| Protein sequence | MASNSGNDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ETKSAGLKSD
DGVPTPQEIC GVLDDYVIGQ AHAKRVLSVA VHNHYKRLNH SDKSDIELAK SNIMLIGPTG
CGKTLLAQTL ARILDVPFTM ADATTLTEAG YVGEDVENII LKLLQASEYN VERAQRGIVY
IDEVDKITRK SDNPSITRDV SGEGVQQALL KIMEGTVASV PPQGGRKHPQ QEFLQVDTTN
ILFICGGAFA GLDKIIAQRG KGSAMGFGAD VRDPDSKSVG EYFKDLEPED LLKFGLIPEF
VGRLPVIATL EDLDEDALVT ILTGPKNALV KQYQRLFELE DVKLTFTDDA MSAIAKRAIL
RKTGARGLRS IMEDILLDTM FDMPGAEGVE EVVVNEEAVN SDTQPLMIYA ERKADEPASA
S
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