| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2795 |
|---|
| Symbol | |
|---|
| ID | 3935260 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2810884 |
|---|
| End bp | 2811669 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905161 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_510737 |
|---|
| Protein GI | 89055286 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.533552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.750296 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAGA CCCGCATCAT CCCCTGCCTC GACGTCGCCG AGGGCCGTAC CGTCAAAGGC
GTCAACTTTG TCGATCTGAT CGACGCGGGC GATCCCGTTG AACAGGCCCG CGCCTATGAC
CTTGCGGGCG CGGATGAGCT TTGTTTTCTG GACATCAAGG CCACCCATGA AAATCGCGGC
ACCATGTATG ATCTGGCCAC CCGCACGGCC GAGCAATGTT TCATGCCGCT GACCATCGGC
GGCGGCGTGC GCACGGTCGA TGACGTGCGC AACCTGCTTC TGGCCGGGGC CGACAAGGTG
TCGTTCAACT CCGCCGCCGT GGCTGACCCT GACTGCGTGG CACGGGCGGC GGACAAGTTC
GGCTCGCAAT GTATCGTTGT GGCCATCGAC GCCAAAACAG TCAGGCCTCC CGCGCCCCTC
CGGGGCGACC CCGGAAGGTG GGAGATCTTC ACCCATGGCG GGCGCAAACC CACGGGCATT
GATGCTGTGG AATTCGCTAA GACCGTCGTG GCCAAGGGTG CCGGTGAAAT CCTGCTGACC
TCCATGGATC GCGACGGCAC AAAGGCGGGC TTCAATCTAC CGCTGACCAG GGCCGTGTCT
GACGCCGTAC CTGTGCCTGT CATCGCATCC GGCGGTGTCG GCACGCTGGA TCACCTGGTT
GAAGGCGTCA CCCAGGGCGG TGCGTCCGCC GTGCTGGCAG CCTCCATCTT CCACTTCGGC
ACCTATACGA TCGGCGAGGC CAAGGCGCAT ATGGCCAAGG CCGGAATTCC TGTGAGGCTG
ACATGA
|
|---|
| Protein sequence | MLKTRIIPCL DVAEGRTVKG VNFVDLIDAG DPVEQARAYD LAGADELCFL DIKATHENRG
TMYDLATRTA EQCFMPLTIG GGVRTVDDVR NLLLAGADKV SFNSAAVADP DCVARAADKF
GSQCIVVAID AKTVRPPAPL RGDPGRWEIF THGGRKPTGI DAVEFAKTVV AKGAGEILLT
SMDRDGTKAG FNLPLTRAVS DAVPVPVIAS GGVGTLDHLV EGVTQGGASA VLAASIFHFG
TYTIGEAKAH MAKAGIPVRL T
|
|---|
| |