| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2742 |
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| Symbol | |
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| ID | 3935206 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2754345 |
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| End bp | 2756225 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905107 |
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| Product | cobalt chelatase, CobT subunit |
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| Protein accession | YP_510684 |
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| Protein GI | 89055233 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4547] Cobalamin biosynthesis protein CobT (nicotinate-mononucleotide:5, 6-dimethylbenzimidazole phosphoribosyltransferase) |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01651] cobaltochelatase, CobT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.178687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGT TCAACCCCTC CGACAACCCC GCCGACCCGT TCAAGAAGGC GCTCGCCGAC
GCGACGCGGG TGATGGCCGA TGATCCTGAA CTGGCGGTGA CATACACGGT GGACCCGCCC
GGGCTCAGCG GCGATAGCGT GCGCTTGCCC CAGGTCAGCC GCCGGATGAC CCGGGAGGAA
GTCTTGCTGG CCCGCGGCAC GGCCGACGCG CTGGCGCTGC GCCACAAATA CCACGACCAT
GGCACCGCCA GCCGTTATGC CCCCCAGGGC GCGATGGCGC GCGACCTGAT GGACGCAATG
GAAAGCGCCC GGTGCGAGGC CATGGGGGCC CGCGACATGC CCGGCACTGC CAGCAACATT
GACGCCAAGA TCGGCAATGA GGCGCGGCGA AAGGGCTATG GAGAGATCCG CGACGCCACC
GACGCCCCCC TATCCACTGC GGCGGGCTAT CTGATCCGGC ACCTCGCTAC GGGGCGCGAT
CTGCCGCCTG AGGCGGCCAA TGTCATGGAG CTCTGGCGCG GATTTATCGA GGATCGCTGC
GACGGCACGT TGGAGGATTT GCAGGACGTT CTGTCCAACC AGACCTCGTT TGCGAAATTC
GCCCGGCAGT TGATTGATGA TCTGGGGTAT GGCGACCAAT TGGGCGACGA TCCCGACGAT
ATCGATGAGG ATGCCGAGGA CGACGCGGGC GAGGACAGCG AAGACGACGC GCCGGACTCG
ACCGGTGAGG ACGACAATGA TGACGAGGAG GCGGAAGCCT CTCCCGAGCG GTCCCAGGAA
GAGCAGCAGG ACGCCTCCCA GGCTCAGGTC GAAATGGACG ACAACGGCGA GATGGAAGAG
GCCGAGGAGC AGGAATTGCC CGACGGCGAG GCCCCGCAAG AGCCTTTGCC GCCTGCCCCC
CACTCCGACG CGGACCCGGA TTACGTGGTG TTTTCCACGG AAAACGACGA GGAAATCGCC
GCAGAGGATT TGGCGGAGGC GCAGGAATTG GAACGCCTGC GGGCCTATCT GGACCAGCAG
CTGGACCCGC TGAAGGGCGC AGTCTCGCGC CTTGCGAACA AATTGCAGCG CCGCTTGCAG
GCGCAACAGA ACCGATCCTG GGAGTTTGAC CGCGAGGAAG GCATTCTGGA TGCGGGGCGC
CTCGCGCGCG TTGTGGCGAA CCCGACCACG CCCCTGTCGT TTAAGGTCGA ACACGACACA
GAGTTCCGGG ACACGGTCGT GACGCTGCTG CTGGACAATT CCGGCTCCAT GCGCGGGCGA
CCGATTTCCA TTGCCGCAAT CTGCGCGGAC GTGCTGGCCC GAACCCTGGA GCGCTGCGGC
GTGAAGGTGG AAATTCTGGG CTTCACGACG CGCGCCTGGA AGGGCGGTAA GGCGCGGGAG
GAATGGTTGG GCGAAGGGCG ACCACAGCAG CCCGGACGCC TGAACGACCT ACGCCATATC
GTCTATAAGT CTGCCGATGC GCCGTGGCGA CGGGTGCGCG ACAATCTTGG CCTGATGATG
AAAGAGGGCC TGCTGAAGGA AAATATCGAC GGCGAGGCAC TGGAATGGGC GCACCGACGG
ATGGTGGGCC GCACAGAGGC GCGCAAGATC CTGATGGTGA TCTCGGACGG GGCGCCGGTC
GATGACAGTA CGCTGTCGGT GAACCCCGCG AACTATCTGG AAAAGCACCT GCGTGACGTG
ATCGCCATGG TCGAAAAGCG CCGCGCGGTG GAGCTGTTGG CGATTGGCAT CGGCCATGAC
GTCACCCGCT ATTATGAGCG GGCGGTGACA ATCACCGATG CGGAGCAATT GGCGGGGGCC
ATCACAGAGC AGCTTGCATC CTTGTTTGAT GCTGATCCCC GTGCGCGGGC CCGCGTGATG
GGGATGAAAC GGGCGGGCTG A
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| Protein sequence | MSKFNPSDNP ADPFKKALAD ATRVMADDPE LAVTYTVDPP GLSGDSVRLP QVSRRMTREE
VLLARGTADA LALRHKYHDH GTASRYAPQG AMARDLMDAM ESARCEAMGA RDMPGTASNI
DAKIGNEARR KGYGEIRDAT DAPLSTAAGY LIRHLATGRD LPPEAANVME LWRGFIEDRC
DGTLEDLQDV LSNQTSFAKF ARQLIDDLGY GDQLGDDPDD IDEDAEDDAG EDSEDDAPDS
TGEDDNDDEE AEASPERSQE EQQDASQAQV EMDDNGEMEE AEEQELPDGE APQEPLPPAP
HSDADPDYVV FSTENDEEIA AEDLAEAQEL ERLRAYLDQQ LDPLKGAVSR LANKLQRRLQ
AQQNRSWEFD REEGILDAGR LARVVANPTT PLSFKVEHDT EFRDTVVTLL LDNSGSMRGR
PISIAAICAD VLARTLERCG VKVEILGFTT RAWKGGKARE EWLGEGRPQQ PGRLNDLRHI
VYKSADAPWR RVRDNLGLMM KEGLLKENID GEALEWAHRR MVGRTEARKI LMVISDGAPV
DDSTLSVNPA NYLEKHLRDV IAMVEKRRAV ELLAIGIGHD VTRYYERAVT ITDAEQLAGA
ITEQLASLFD ADPRARARVM GMKRAG
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