Gene Jann_2720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2720 
Symbol 
ID3935184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2727771 
End bp2728148 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content62% 
IMG OID637905085 
ProductNADH dehydrogenase 
Protein accessionYP_510662 
Protein GI89055211 
COG category[C] Energy production and conversion 
COG ID[COG3761] NADH:ubiquinone oxidoreductase 17.2 kD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.318843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCT ACCTCAACCG CATCTTCACC TGGTGGAATG GCCAGACGAT TGGCACGCAA 
ATCTTCACCG CCCGCAGAGG CAACAAGGTG GGCGAAGATG CCGAGGGCAA CGTGTTCTAC
CGCAACGCCG ACGACAGCAA GCGCTGGGTG ATTTTCAACG GTGATGTGGA AGCATCTCGG
ATTGATCCGG AATGGCACGG CTGGTTGCAC CGCACGTGGG ATGAGCCGCC GACGGAAAAG
CCAGTGGTCC ACAAACCGTG GGAAACGCCC CATCTGCCGA ATTTGACCGG CTCGCCTCTC
GCGCACGCGC CTGCGGGCTC CATCCGCCGG GCGGAACCGG AAGCGCGCCG CGATTATGAG
GCCTGGTCGC CGGAATAG
 
Protein sequence
MASYLNRIFT WWNGQTIGTQ IFTARRGNKV GEDAEGNVFY RNADDSKRWV IFNGDVEASR 
IDPEWHGWLH RTWDEPPTEK PVVHKPWETP HLPNLTGSPL AHAPAGSIRR AEPEARRDYE
AWSPE