Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2651 |
Symbol | |
ID | 3935115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2664983 |
End bp | 2665480 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637905016 |
Product | MarR family transcriptional regulator |
Protein accession | YP_510593 |
Protein GI | 89055142 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00357574 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0103699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGC ACGCGCCCCT TGCCTCGCCA ACCCAGACCG GGTTTCTGGC AGGCTATCTG GAATCCCTTG CCATGGTGGA GCGCCTGCAT CGGCTGCTGC TCGACGTGAT CAAGGACGAA TTTGAACGTT TGGGGGTGCT TGATATCAAC GCCGTCCAGG CCCTGTTGCT GTTCAATATC GGCGACAATG AGGTGACGGC TGGCGAGTTG AAATCGCGCG GCTATTATCA GGGCTCCAAC GTCAGCTACA ACCTCAAGAA GCTGGTGGAC ATGGGCTATA TGCATCACCA GAAGTGTGAG ATTGACCGCC GCTCGGTTCG GGTGCGCCTG ACCGAAAAGG GCCGCCATGT GCGCGACACC GTGGACGGTC TATTCGAGCG GCACTCGGAA GGTCTGGAGA AGCAGGGCGT GATGAGCGCG GATGGCGTGG ACCGCCTGAA CCACTCCCTC AAGCGGATAG AGCGGTTCTG GTCGGATCAG ATTCGCTACA TTTACTAA
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Protein sequence | MSMHAPLASP TQTGFLAGYL ESLAMVERLH RLLLDVIKDE FERLGVLDIN AVQALLLFNI GDNEVTAGEL KSRGYYQGSN VSYNLKKLVD MGYMHHQKCE IDRRSVRVRL TEKGRHVRDT VDGLFERHSE GLEKQGVMSA DGVDRLNHSL KRIERFWSDQ IRYIY
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