| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2640 |
|---|
| Symbol | |
|---|
| ID | 3935104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2653991 |
|---|
| End bp | 2655040 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637905005 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_510582 |
|---|
| Protein GI | 89055131 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0268682 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.013734 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACAGA TCCGGCTCAA CCACGTCTCC AAGCGATGGG GCAGTTTTGT GGGTGTGGAT
GATTTCCACC TCGATATCGC GGATCAGGAA TTTCTGGTGC TGCTGGGGCC GTCGGGCTGC
GGCAAGACCA CGACGATGCG GATGATCGCG GGGCTGGAAG ACCCTTCGGG CGGTGAGATC
TGGATTGGCG ACCGGGAAGT CACGACGCTG GACCCTAAGG ACCGCGACGT GGCGATGGTG
TTCCAGAGCT ACGGTTTGTA CCCGAACATG ACGGTGTGGG AGAACATTCG CTTCCCCCTG
AAAGTCCGCA AGGTGCCCGA GAGCGAGCAC GAGGAGCGCG TGGCGCGGGC GGCGGCGATG
GTGGAGCTGG AAGACTTCAT GCACCGCAAG CCTGCCGCCT TGTCCGGTGG CCAACGCCAG
CGCGTTGCCC TGGCCCGCGC GATTGTGCGT GAGCCGCAGG TGTTCCTGAT GGATGAGCCG
CTGTCGAACC TGGATGCCAA GCTGCGCGTC AGCACGCGGG CGCAGATCAA GAACCTGAGC
CATGAATTGA AGGTGACGAC CATCTATGTG ACCCACGACC AGATCGAAGC CATGACGCTG
GCCGACCGCG TTGTCGTGAT GAAGGCGGGG ATCGTCCAGC AGGTGGGCAC GCCCACGGAT
ATCTATGACA ACCCGGCCAA TACGTTTGTG GCGGGGTTCA TTGGCAGCCC GGCGATGAAC
CTGATGGAGG GTGAGATCAC CAACGGGGCC TTCAGGGGCG AGAACGTGGA GGTCAGCGGC
CTGTCCGGCG CGAACGGCAA GGTGACGCTC GGGTTCCGGG CCGAGGATGC AACGGTCACG
GATGCGGGGC AGGGAGCGAT CACCGCCCCG GTCTATTCGA TGGAGTTGTT GGGCGACGCC
ACCATGGTCA CCGTGAAAGC AGGCGGCGCC ATGGTTGCGG TGAAAGCGCC CAAGGATTAC
CGCGCCAAGA TCGGAGAGCC CGTGGGCATC GCCTTGCCCG ACGGGATCAC GCATCTGTTC
GATGCCACGA CTGGCGCGCG GATCGGGTAA
|
|---|
| Protein sequence | MAQIRLNHVS KRWGSFVGVD DFHLDIADQE FLVLLGPSGC GKTTTMRMIA GLEDPSGGEI
WIGDREVTTL DPKDRDVAMV FQSYGLYPNM TVWENIRFPL KVRKVPESEH EERVARAAAM
VELEDFMHRK PAALSGGQRQ RVALARAIVR EPQVFLMDEP LSNLDAKLRV STRAQIKNLS
HELKVTTIYV THDQIEAMTL ADRVVVMKAG IVQQVGTPTD IYDNPANTFV AGFIGSPAMN
LMEGEITNGA FRGENVEVSG LSGANGKVTL GFRAEDATVT DAGQGAITAP VYSMELLGDA
TMVTVKAGGA MVAVKAPKDY RAKIGEPVGI ALPDGITHLF DATTGARIG
|
|---|
| |