Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2610 |
Symbol | |
ID | 3935073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2625788 |
End bp | 2626666 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904974 |
Product | LysR family transcriptional regulator |
Protein accession | YP_510552 |
Protein GI | 89055101 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.309189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.877697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCGG CGGGGCGCGA TTTGCGTATT TCGCCAGCTG TCACGTCGTC TCGGATTTCG CAGCTGGAGG AGCATCTGAG CGTGCGGCTG TTCCAGCGCA CCACGCGCAG TCTGACGCCG ACGGAACATG GCAAGGCCTT CTATTCCGGC GCGAAGGAAA TCCTTGAATC GGTTGAGAAT GCCGAAGCGC AAGTCATTGA TATCACGGAG AACCCAAAGG GGTCACTCTA TGTGGCTGCC CCTTTGGGTG TGGGACGTCG CCTGATTGCC CCGGAGGTGC CGGGGTTCCT TGACCTTTAT CCGGAGGTTC GCGTGCGCCT GCGTCTGACC GACCGGAAAG TGGATCTGAC GACCGAAGGC CTCGACCTCG CGTTTTTTCT GGGGGAGCCT GAGGACAGCA CGCTTCGTAT CCGCAAGATC GCGGACGTGG AACGGGTTCT GTGCGCCGCG CCAGACTACG TTGCGGCCCG CGGTATGCCT GCGGGCGGTG CGGAGCTGAC GTCTGGGGCG CATGAATGCC TCAACCTGCG ATTTCCCGGC GCGACGGAAT TCCAGTGGCA CCTGAAGACA CCGGACGGAC CCAAGCGCTT CCGCATCCAG GGGCGCTACG AATCCGATGA TGGTGATGTG CTGAATGACT GGGCGTTGGC GGGTCAAGGC ATTGTGATGA AACCGATTTT TGAGGTGGCC GAGCATCTGA AGGCGGGCCG GTTGGTGGCG GTGGCGCAGG AAACGCCGCC GATGCCGATC CAGATGGCGT GCCTGTTCAC CCATCGCCGG ATGCAGGATC CGAAGACGCG GCTCTTCATG GAATTCGTGA TCAACCGCAT TGGCGATCTG GTGCGGCAGG CCGAAAAGCT GGGTCAGCTG CCGCGATAG
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Protein sequence | MSAAGRDLRI SPAVTSSRIS QLEEHLSVRL FQRTTRSLTP TEHGKAFYSG AKEILESVEN AEAQVIDITE NPKGSLYVAA PLGVGRRLIA PEVPGFLDLY PEVRVRLRLT DRKVDLTTEG LDLAFFLGEP EDSTLRIRKI ADVERVLCAA PDYVAARGMP AGGAELTSGA HECLNLRFPG ATEFQWHLKT PDGPKRFRIQ GRYESDDGDV LNDWALAGQG IVMKPIFEVA EHLKAGRLVA VAQETPPMPI QMACLFTHRR MQDPKTRLFM EFVINRIGDL VRQAEKLGQL PR
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