Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2550 |
Symbol | |
ID | 3935013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2553134 |
End bp | 2553841 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637904914 |
Product | 5-methyltetrahydrofolate--homocysteine S-methyltransferase |
Protein accession | YP_510492 |
Protein GI | 89055041 |
COG category | [R] General function prediction only |
COG ID | [COG5012] Predicted cobalamin binding protein |
TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATC AAGACGACGA CATCATCCTG TCCGAGCTGA ACGACGAAGA TCTTGTCGCG CAGATGTTCG ACGACCTTTA CGACGGCCTC AAGGAAGAGA TCGAGGAGGG CGTGAACATC CTGCTTGAGC GGAAGTGGGA GCCCTACCGC GTCCTGACCG AAGCGCTTGT GGGCGGTATG ACCATCGTCG GCAACGACTT CCGCGACGGC ATCCTGTTCG TGCCCGAGGT GCTGATGGCG GCCAACGCGA TGAAGGGCGG CATGGCGATC CTGAAGCCAC TGCTGATCGA GACGGGCGCG CCCCGCGTGG GCAAGATGGT CATTGGCACG GTCAAAGGCG ACATCCACGA CATCGGCAAG AACCTCGTAT CGATGATGAT GGAAGGCGCG GGCTTTGAGG TCGTGGATCT GGGCATCAAC AATGCCGTGG AAAGCTACCT TGAGGCGCTG GAGACGGAAC AGCCTGACAT CCTCGGCATG TCCGCGCTTC TGACGACCAC CATGCCCTAC ATGAAGGTCG TCATCGACAC GCTGAATGAG AAGGGCATCC GCGACGATTA CATCGTTCTG GTGGGCGGTG CGCCCCTGAA CGACGAATTC GGCAAGGCCA TCGGCGCAGA TGCCTATTGT CGCGATGCTG CCGTGGCGGT CGAAACGGCC AAGGAATGGG TGGCTCGCAA GCATAACCAG ATGAGCGCCT CGGCCTAG
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Protein sequence | MSDQDDDIIL SELNDEDLVA QMFDDLYDGL KEEIEEGVNI LLERKWEPYR VLTEALVGGM TIVGNDFRDG ILFVPEVLMA ANAMKGGMAI LKPLLIETGA PRVGKMVIGT VKGDIHDIGK NLVSMMMEGA GFEVVDLGIN NAVESYLEAL ETEQPDILGM SALLTTTMPY MKVVIDTLNE KGIRDDYIVL VGGAPLNDEF GKAIGADAYC RDAAVAVETA KEWVARKHNQ MSASA
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