Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2472 |
Symbol | |
ID | 3934929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2466982 |
End bp | 2470692 |
Gene Length | 3711 bp |
Protein Length | 1236 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904830 |
Product | ribonucleotide-diphosphate reductase subunit alpha |
Protein accession | YP_510414 |
Protein GI | 89054963 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
TIGRFAM ID | [TIGR02504] ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0474976 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGATTG AACGGCGATT TACCCGTGAC GGCGCAGATG TGTACGCGGA TCAGACCTTT ACCACGACCA CGTCGGAGAT CCGCAATCCC GACGGCACGA TCGTGTTCAA GCTCGACAAT GTCGAAGTGC CGACCGGCTG GAGCCAGGTT GCCTCTGACG TGATCGCCCA GAAATACTTC CGCAAGGCTG GTGTGCCCGC GGCCACCAAG CCCGTGAAGG AAAAAGGCGT TCCCGCATTC CTTCAGCGCC ACGTGGCCGA CGATAAGGCG CTGGAGGCTA TGCCGGAGGA CCAGCGTTAT GGTGGCGAAA CGTCCGCCAA GCAGGTCTTC CGGCGCCTTG CCGGAGCGTG GGCCTATTGG GGCTGGAAGG GCGGATACTT CACGTCCGAG TCTGACGCGC AGGCCTATTT CGATGAGATG CAGCTGATGC TGGCGCGCCA GATGGCCGCG CCCAATTCCC CGCAATGGTT CAACACCGGC CTGCACTGGG CATACGGCAT CGACGGCCCG GCGCAGGGGC ACCATTATGT CGACTACAAG AGTGGCAAGC TGACGAAATC CACGTCGTCT TATGAGCATC CTCAGCCCCA CGCCTGCTTC ATTCAGGGCG TGAAGGATGA TCTGGTGAAC GACGGCGGCA TCATGGACCT GTGGGTGCGG GAGGCGCGTC TGTTCAAATA TGGCTCCGGC ACCGGCACCA ACTTCAGCCA CCTGCGCGGC GAGGGCGAGA AGCTATCAGG CGGTGGCAAA TCCTCCGGCC TGATGGGCTT CCTGAAGATC GGTGACCGCG CGGCGGGCGC GATCAAGTCC GGCGGCACCA CGCGGCGCGC GGCCAAGATG GTCATCGTCG ACGCAGACCA CCCCGATATC GAAGACTTCA TCGAATGGAA GGTGCTGGAA GAGCAGAAAG TGGCGAGCAT CGTCGCGGGC TCCAAGATGC ATGAAAAGAT GCTGAACGGC ATTTTCGGCG CGATCAAAGA CTATAAAGCA GAGGGTGTTG CACTTCATGC AACTGGGGAC GGATCGCTGG AGGATGCAGT CGATCCGGCC AAGAACCAGA GCCTGAAGCA GGCGATCCGG GAGGCCAAAA AGGTCGCGAT CCCCGAGACT TACGTCAAGC GCGTGCTGGA CTATGCCAAG CAGGGCCACA CGTCGATTGA ATTCCCCACC TACGACACGG ATTGGGACTC TGAGGCCTAT AACTCCGTCT CGGGCCAGAA CTCCAACAAC TCCATCCGCG TGACCGACGC CTTCCTCAAG GCCGTCGAAA ATGATGACGA TTGGCAGCTG ATCAACCGCC GCGACGGCAA AGTCTCCAAG ACGATCAAGG CCCGCGATCT GTGGGAAAAG GTCGGCCATG CGGCGTGGGC CTGCGCGGAC CCGGGCATTC AGTACCACGA CACGGTCAAT GCCTGGCACA CATGCCCCGA AGACGGGGCG ATCCGGGGCT CCAACCCGTG CTCCGAATAC ATGTTCCTGG ACGACACGGC GTGCAACCTT GCGTCGATGA ACCTGCTGAC GTTCTACGCG GGCGGCACGT TCGACGCGGA ATCCTACATG CACGCCTGCC GGTTGTGGAC GCTGACGCTG GAAATCTCCG TCATGATGGC GCAGTTCCCG TCCAAGGAAA TCGCGCAGCG CTCCTATGAT TTCCGCACGC TGGGTCTGGG GTTTGCCAAT ATCGGCGGGT TGCTGATGAA CACGGGGCAT TCCTATGACA GCGCGGAAGG CCGTGCCCTC TGCGGCTCCC TCACTGCGAT CATGACCGGG GTGGCTTATG CAACCTCTGC CGAGATCGCG TCGGAACTGG GGCCCTTCGC GGGCTTCGCC AAGAACCGCG AGCATATGCT GCGGGTGATG CGCAACCACC GCGCCGCCGC CTATGGCAAG ACCGACGGCT ACGAGGAGGT CAACGTCAAC CCCGTCGCCC TCGACCACAT CAACTGCCCC GACCAGACAC TGGTTGAACT GGCCAAGCAG GCCTGGGACG AGGCGCTGAC CCTGGGCGAG GCCCACGGCT ACCGCAACGC GCAGGCCACC GTCATCGCAC CCACCGGCAC CATTGGCCTG GTCATGGATT GCGACACCAC GGGCATCGAG CCCGACTTCG CCCTGGTGAA GTTCAAGAAG CTCGCCGGTG GCGGATATTT CAAGATCATC AACCAGTCCG TTCCGGCGGC GCTGGAAGGT CTGGGCTATG CCTCCAGCCA GATCGAGGAA ATCATCGCCT ATGCGGTCGG TCACGGCACC ATCGGGCAGG CGCCGGGCAT CAACCACACC TCCCTGATCG GCCACGGCTT TGGCCCGGAA GAGATCCGCA AGATCGAAGA GGCGCTGCCG CAGGCGTTCG ACATCCGCTT CGTGTTCAAC CAGTGGACCC TTGGCGCAGA GTTCTGCACC GAGACCTTGG GCATCCCGGC CGACAAGCTG AATGATCCGA CGTTCGACCT GCTGCGCCAC CTTGGCTTCA CCAAGGCCGA TATCGAGGCC GCGAATGATC ACGTCTGTGG GACAATGACG CTGGAAGGCG CACCGTTCCT GAAGGACGAA CACCTGCCGG TCTTCGATTG CGCCAACCCC TGCGGCAAGA AGGGCAAGCG GTATCTGTCC GTGGAGGCGC ACATTCACAT GATGGCCGCC TCGCAATCCT TCATCTCGGG CGCGATTTCC AAGACGATCA ACATGGCCAA CCACGCCACG ATCGAGGATT GCCAGAAGGC GTATGAGCTG TCCTGGTCCC TTGGGGTGAA GGCCAACGCG CTCTACCGTG ATGGGTCCAA GCTGTCGCAA CCCCTCGCCG CCGCTCTGGT CGAGGATGAT GACGACGCCG CAGAGATCCT GGAAACCGGG ACCGCCCACG AGAAAGCGCA AGTGCTGGCC GAGAAGGTGG TCGAGAAGAT CATCGTCAAG GAAATCGCGC GGGGCCGCGA AAAGATGCCC CAGCGCCGGA AGGGCTATAC CCAGAAGGCC ATCGTCGGCG GGCACAAGGT CTACCTGCGC ACCGGCGAAT ATGAGGACGG CAACCTGGGT GAGATCTTCA TCGACATGCA CAAGGAAGGC GCGGGCTTCC GGGCGATGAT GAACAACTTC GCCATCGCGG TCAGCGTGGG CCTGCAATAC GGCGTGCCGC TGGAGGAGTT CGTGGACGCC TTCACCTTCA CCAAGTTCGA GCCCTCGGGC ATGGTGCAGG GCAACGAGAC GATCAAGAAC GCCACTTCGA TCCTCGACTA CATCTTCCGG GAACTGGCCG TCAGCTATCT GGATCGCACC GATCTGGCCC ATGTGGCCCC CACGGGCGAC ACGTTCGATG ATGTGGGTCG CGGGGCCGAG GAGGGCGTGA GCAACTTCAC CGAAGTGCCC GGCTCCCGCG CGACCTCTGC GGTGGATGTG CTGAAACAGG TCGCCTCCAC CGGCTACCTC CGCAACCGCG CGCCCCAGGA ATTGCATGTA TTGCAGGGCG GCATGGCGGC CGATCCGGTC GCGGTGCTGG AGACACTGGT GCCAGAAGTG AAGGGCAGCG GCGGCACTAT TGCGGCGGCG ACCTCCACCA CGGTGGTCTC CACCGGAGCC GTCTCCCTCG ACGCGCGGAC AAAGGCGAAG ATGCAGGGCT ACGAGGGCGA GGCTTGCGGC GAGTGCGGCA ACTACACGCT GGTGCGCAAC GGGACCTGCA TGAAGTGCAA TACATGCGGC GGGACGTCCG GGTGTAGCTG A
|
Protein sequence | MKIERRFTRD GADVYADQTF TTTTSEIRNP DGTIVFKLDN VEVPTGWSQV ASDVIAQKYF RKAGVPAATK PVKEKGVPAF LQRHVADDKA LEAMPEDQRY GGETSAKQVF RRLAGAWAYW GWKGGYFTSE SDAQAYFDEM QLMLARQMAA PNSPQWFNTG LHWAYGIDGP AQGHHYVDYK SGKLTKSTSS YEHPQPHACF IQGVKDDLVN DGGIMDLWVR EARLFKYGSG TGTNFSHLRG EGEKLSGGGK SSGLMGFLKI GDRAAGAIKS GGTTRRAAKM VIVDADHPDI EDFIEWKVLE EQKVASIVAG SKMHEKMLNG IFGAIKDYKA EGVALHATGD GSLEDAVDPA KNQSLKQAIR EAKKVAIPET YVKRVLDYAK QGHTSIEFPT YDTDWDSEAY NSVSGQNSNN SIRVTDAFLK AVENDDDWQL INRRDGKVSK TIKARDLWEK VGHAAWACAD PGIQYHDTVN AWHTCPEDGA IRGSNPCSEY MFLDDTACNL ASMNLLTFYA GGTFDAESYM HACRLWTLTL EISVMMAQFP SKEIAQRSYD FRTLGLGFAN IGGLLMNTGH SYDSAEGRAL CGSLTAIMTG VAYATSAEIA SELGPFAGFA KNREHMLRVM RNHRAAAYGK TDGYEEVNVN PVALDHINCP DQTLVELAKQ AWDEALTLGE AHGYRNAQAT VIAPTGTIGL VMDCDTTGIE PDFALVKFKK LAGGGYFKII NQSVPAALEG LGYASSQIEE IIAYAVGHGT IGQAPGINHT SLIGHGFGPE EIRKIEEALP QAFDIRFVFN QWTLGAEFCT ETLGIPADKL NDPTFDLLRH LGFTKADIEA ANDHVCGTMT LEGAPFLKDE HLPVFDCANP CGKKGKRYLS VEAHIHMMAA SQSFISGAIS KTINMANHAT IEDCQKAYEL SWSLGVKANA LYRDGSKLSQ PLAAALVEDD DDAAEILETG TAHEKAQVLA EKVVEKIIVK EIARGREKMP QRRKGYTQKA IVGGHKVYLR TGEYEDGNLG EIFIDMHKEG AGFRAMMNNF AIAVSVGLQY GVPLEEFVDA FTFTKFEPSG MVQGNETIKN ATSILDYIFR ELAVSYLDRT DLAHVAPTGD TFDDVGRGAE EGVSNFTEVP GSRATSAVDV LKQVASTGYL RNRAPQELHV LQGGMAADPV AVLETLVPEV KGSGGTIAAA TSTTVVSTGA VSLDARTKAK MQGYEGEACG ECGNYTLVRN GTCMKCNTCG GTSGCS
|
| |