Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2444 |
Symbol | |
ID | 3934901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2436242 |
End bp | 2437237 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904802 |
Product | transcriptional regulator |
Protein accession | YP_510386 |
Protein GI | 89054935 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0668048 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000772272 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCGGACA AAGCTGCGCG GCTGCGCCCC GGTGAAGGCC CCAAGCAATT CGTCTTCGTC CTGCTGGACC AGTTTACGAT GCTGTGTTTC GCCTCCGCCG TGGAGGCGCT GCGCATTGCC AACCGCATGT CGGGCCGGGA GTTGTACCGC TGGACCCTGG CGGGTGAAGG CGGCGACTAC GCCCAAAGCT CGGCCGGGAT CTGGTTTCGC CTCGACAGCG ATCTGAGCGA GGTGACACGC GACGACGTCG TCTTGCTGTG CGGCGGGATC GACGTGGCAA ACGCCACCAC CAAACGGCTG CTCAGCTGGG TCCGGCGAGA GGCGCGCAAA GGCCCCGTCA TGGCCGGGCT TTGTACGGCG GGCTATACGC TGGCCAAGGC CGGGCTTCTG GATGGCAAGC GCGCCACGAT CCATTGGGAA AACCAGGACA GCTTCGCGGA AGAGTTTGAA GAGGTCACGC TGACCAAATC GGTCTTTGTC GTCGATGGGC CGCGCATCAC GACCGCCGGG GGCACGGCGT CGATTGACCT GATGCTGAAG TTGATCGCCG AGGATCACGG CGAGGATCTG GCCAATCTGG TGGCCGATCA GTTGATCTAC ACGTCGATAA GAACGGATCA GGACACGCAG CGCCTGTCGA TCCCCACGCG CATCGGCGTG CGCCACCCGA AGCTGGGGCA AGTGATCCGG ATGATGGAGC AGAATATCGA AGATCCCATT AGCCCGGCGC AACTGGCGAT GGATGTGGGC ATGTCGACCC GGCAGCTGGA ACGGCTGTTC CGCCGCTACC TCAACCGCTC CCCCAAGCGG TATTATATGG AGTTGCGGTT GGGCAAAGCG CGCAATCTGC TGATGCAGAC GGATATGAGC GTGATCAACG TGGCACTGGC CTGCGGATTT GCCTCGCCGT CGCATTTTTC CAAATGCTAT CGGGCCCATT ACGACACTAC ACCCTACCGC GAGCGTGGCA GCCACGCGGC CCGCGCCAAA GTGTGA
|
Protein sequence | MSDKAARLRP GEGPKQFVFV LLDQFTMLCF ASAVEALRIA NRMSGRELYR WTLAGEGGDY AQSSAGIWFR LDSDLSEVTR DDVVLLCGGI DVANATTKRL LSWVRREARK GPVMAGLCTA GYTLAKAGLL DGKRATIHWE NQDSFAEEFE EVTLTKSVFV VDGPRITTAG GTASIDLMLK LIAEDHGEDL ANLVADQLIY TSIRTDQDTQ RLSIPTRIGV RHPKLGQVIR MMEQNIEDPI SPAQLAMDVG MSTRQLERLF RRYLNRSPKR YYMELRLGKA RNLLMQTDMS VINVALACGF ASPSHFSKCY RAHYDTTPYR ERGSHAARAK V
|
| |